Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46275 |
Symbol | |
ID | 7201479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011677 |
Strand | + |
Start bp | 792234 |
End bp | 793933 |
Gene Length | 1700 bp |
Protein Length | 427 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180514 |
Protein GI | 219119510 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCGTCCCCAA CTTTTACACT CACAATTTGC CAAAACTGGT CCTTTGGAAC AGTCGCAACA GTTTGCGATT CCGGTATATC CACAACGACA ACTCCAAGAA TAACCAAAAG TACATCAAGC CCCAGTCTAA CAACTAGGTC ATCTACAGCT ATATCTTCCA GTTCTCTCTT TCCATCACAA TGCCACCGAA CGCCCGCCCC TCCGCGACCC TTTTTTACGA CGACTCAACG ACGCCCGAGG TGCCTTCGTC CGCACGGCAC GGTTCCAACT TGGGGCTCAA GAATGCCATT GCAGAAATGC TGGACAAGCA TGCGGATACG GACGGTCTTT CCAAGATCAG CTCGGACAAC GAGGACTGGA CCGACGTCAA GCACAGCGAA CGGAAGAAGC GCGATCGGAT TCTCGACGAT GGTGTCCTGA TTGGGCTCAT GAAAAAGTCA GACTATCAAG GTTTTAAGCG ACTCGCTATC AATCTTACCA TCATGGCTGC GACGGCCTTT GCGATTCACC GTCTCAATGT GCTCCCGGCG CTTATTATCC GCCAATCGCC ATGGACGGTA TCCCAGCTGG CCACTTTTGT TCCGCTGTAC TTTTTCTACG GCTTCCAATT TCAGTGCTTT GCCTTTGCCG GTCAGCACGA GTTTCTCCAC CGTAACGCGT TCAAGACCAA GTGGTACAAC GACGCGGTAC TCTTCCTAAC GGGATGTTTC TGTTTCGAAC TAGGGGAGCA TGAACGCGTA ATGCACAAAC AACACCACAC TTACACCAAC CATATTGACA AGGATCCCGA GCTCACTAGC TACTACACAC GCGAACAACT CGAGAATCCA GGCTTCCGCA ACGTCCCCTT TACGCGATTC GGCTACTTGC GGCAATTTTT TGACATTTTC AACACCTTCA AGTGCCGGGC GGGGCGCATT GTGTTTTCCG CCCTCGGAGT GCCAGTCGAC TACAGTGGAA CTGGCTGGAG TCTCCGCGAC TTCAACTACA GTCGAGAAAG CGGAATTTTG CGTAGATTGC AAATGACCGC CATTGCCCAG CTCGTCTTTT ACACGAGCAT GATGGGTTTT TTTGGACGCA CCCGTCAAGG AGCGGCGGCT CTATTGTTTT GGTGGATTGT CCCGGTATTG ATTGGCTACC CGGTCGTCAA TTACTTTCGA AATCTTGAAC ACGCTGACTG CGAAGTGTCC AAACTCAACA ACAATTTGCG CAACACGCGG TCGGTCCGCA CTAACCTCCT TGTACGACTA CTGTTGTGGG ATACTAATTT CCACGCTGAG CACCACTGCT ATCCGATGGT GCCCTTTTTC AATCTCCACA AACTCAACCA GCTTATGTAT GAACACGTGC TGCACAACGA AAAGGATCAT TTCACGACGC AGAACTGGCA AGCCTTTAAG CCCGGCGGTT GGATTGATCA ACAGTCCAGG CGCATGGCGA CCTTTGCTGA CAAGAGCGAA TAAAAATGGA AACCAGCAGG TGTTTCCGGG ATGATTTTTG AATGATGCGG GCGTTCACAA CAGACTCCGT ACTCAATCGC TAGCTATCGC TATGGCTACT TTACCTACAT CTATATTTCC TCCTTTGACG GGCTGGTGCG GCATGCTTCG GCCGACACAT TCCGAGCCGG CTTTTTGAAC GGCACTTTTT TGCGCAAATC GTAGCGCACG TTCAGTATCT AGTTTTTATA TTTTGGTTGA
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Protein sequence | MPPNARPSAT LFYDDSTTPE VPSSARHGSN LGLKNAIAEM LDKHADTDGL SKISSDNEDW TDVKHSERKK RDRILDDGVL IGLMKKSDYQ GFKRLAINLT IMAATAFAIH RLNVLPALII RQSPWTVSQL ATFVPLYFFY GFQFQCFAFA GQHEFLHRNA FKTKWYNDAV LFLTGCFCFE LGEHERVMHK QHHTYTNHID KDPELTSYYT REQLENPGFR NVPFTRFGYL RQFFDIFNTF KCRAGRIVFS ALGVPVDYSG TGWSLRDFNY SRESGILRRL QMTAIAQLVF YTSMMGFFGR TRQGAAALLF WWIVPVLIGY PVVNYFRNLE HADCEVSKLN NNLRNTRSVR TNLLVRLLLW DTNFHAEHHC YPMVPFFNLH KLNQLMYEHV LHNEKDHFTT QNWQAFKPGG WIDQQSRRMA TFADKSE
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