Gene PHATRDRAFT_46002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_46002 
Symbol 
ID7200862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp930135 
End bp931097 
Gene Length963 bp 
Protein Length231 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180145 
Protein GI219118756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0390723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGGATGCATC GGTGCCGTCC GTAGGTATCA ACGGTAGTAT ACGAACCTAC GCTGTGAAAC 
CAACAAGAGA CACGCAGTAG CAAAATTGAT TGATACGTAC AAACCTGGGT TCGCGAACCA
AAGAAAGACC ATGGGAACGA TTTTTGGCAA ACAGACTGTA GCGGAGCCCG CCTTTGAGGT
GTTGTATCGG CAGACGCAGC AGGCTTACGA AATCCGGCGG TACGCGACGC GTTTTGCGGC
GTCCACTTCA ACGGATGCGA ACTCGGACAG TGCTCCCTTC AACGCTCTCG CTCGCTACAT
CGGAGTCTTT GGGACACCGG AGAATCAAGG CCGGACGGCG ATTAGTATGA CCGCTCCCGT
GGTCAAGGAA GAATCATCGG GTTCATCACA ACCAGAGGCC ATGGCTATGA CGGCGCCCGT
CGTCAAGACG CCGTCCGATC CGAATGGCGA GGCTGGAATG GTGATGAAGT TTATTCTTCC
GGCGGCGTAC GACTCCATGG AGAAGATTCC GCAACCCACC AATCCACGCG TGCATATTGA
GGAAATTCCT CCGGCGGTGG GAGCCGTGCA CCGGTACTCG GGTAGTTTCG ATGACGCCGT
CTCGCGGAAC AAAGCCCGAT GGTTGGCGCA GCAATTGCGA GAGGATGGGG TGGATATTAC
CGAAGATTAC GCCGTCGAGC ACTATCAGTT TTGGGGATAC AATCCACCGT TTACGCTACC
CATGTTCCGT CGCAACGAAG TATGGATTGA ATTGGACGCG ACGCAGGTTG ATCAGATTGT
GAACGGCAAG GGAGGTGCGG CGAGTTCTAC GACGGCCGTC AACTAACGCG TGGAGTGGGA
TTGACGGTGA GGAATACCAG TGACTATTGG CGTGTGTCGG TACGCTCGCG TACACCCGGC
AGGTTTACCC ATGCATTTAT GTTACCTATC TATACCCCCC GGGAAAATAT TCTGTTGCCG
ATA
 
Protein sequence
MGTIFGKQTV AEPAFEVLYR QTQQAYEIRR YATRFAASTS TDANSDSAPF NALARYIGVF 
GTPENQGRTA ISMTAPVVKE ESSGSSQPEA MAMTAPVVKT PSDPNGEAGM VMKFILPAAY
DSMEKIPQPT NPRVHIEEIP PAVGAVHRYS GSFDDAVSRN KARWLAQQLR EDGVDITEDY
AVEHYQFWGY NPPFTLPMFR RNEVWIELDA TQVDQIVNGK GGAASSTTAV N