Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_46002 |
Symbol | |
ID | 7200862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 930135 |
End bp | 931097 |
Gene Length | 963 bp |
Protein Length | 231 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180145 |
Protein GI | 219118756 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0390723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGGATGCATC GGTGCCGTCC GTAGGTATCA ACGGTAGTAT ACGAACCTAC GCTGTGAAAC CAACAAGAGA CACGCAGTAG CAAAATTGAT TGATACGTAC AAACCTGGGT TCGCGAACCA AAGAAAGACC ATGGGAACGA TTTTTGGCAA ACAGACTGTA GCGGAGCCCG CCTTTGAGGT GTTGTATCGG CAGACGCAGC AGGCTTACGA AATCCGGCGG TACGCGACGC GTTTTGCGGC GTCCACTTCA ACGGATGCGA ACTCGGACAG TGCTCCCTTC AACGCTCTCG CTCGCTACAT CGGAGTCTTT GGGACACCGG AGAATCAAGG CCGGACGGCG ATTAGTATGA CCGCTCCCGT GGTCAAGGAA GAATCATCGG GTTCATCACA ACCAGAGGCC ATGGCTATGA CGGCGCCCGT CGTCAAGACG CCGTCCGATC CGAATGGCGA GGCTGGAATG GTGATGAAGT TTATTCTTCC GGCGGCGTAC GACTCCATGG AGAAGATTCC GCAACCCACC AATCCACGCG TGCATATTGA GGAAATTCCT CCGGCGGTGG GAGCCGTGCA CCGGTACTCG GGTAGTTTCG ATGACGCCGT CTCGCGGAAC AAAGCCCGAT GGTTGGCGCA GCAATTGCGA GAGGATGGGG TGGATATTAC CGAAGATTAC GCCGTCGAGC ACTATCAGTT TTGGGGATAC AATCCACCGT TTACGCTACC CATGTTCCGT CGCAACGAAG TATGGATTGA ATTGGACGCG ACGCAGGTTG ATCAGATTGT GAACGGCAAG GGAGGTGCGG CGAGTTCTAC GACGGCCGTC AACTAACGCG TGGAGTGGGA TTGACGGTGA GGAATACCAG TGACTATTGG CGTGTGTCGG TACGCTCGCG TACACCCGGC AGGTTTACCC ATGCATTTAT GTTACCTATC TATACCCCCC GGGAAAATAT TCTGTTGCCG ATA
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Protein sequence | MGTIFGKQTV AEPAFEVLYR QTQQAYEIRR YATRFAASTS TDANSDSAPF NALARYIGVF GTPENQGRTA ISMTAPVVKE ESSGSSQPEA MAMTAPVVKT PSDPNGEAGM VMKFILPAAY DSMEKIPQPT NPRVHIEEIP PAVGAVHRYS GSFDDAVSRN KARWLAQQLR EDGVDITEDY AVEHYQFWGY NPPFTLPMFR RNEVWIELDA TQVDQIVNGK GGAASSTTAV N
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