Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45996 |
Symbol | |
ID | 7200856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | - |
Start bp | 895835 |
End bp | 896935 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180341 |
Protein GI | 219119149 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.216905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACACG CAGAAAAAGT GTGTCGGATT CGTTCCGACA AGCATTGTGA CTCATCACTC ACTGTCTACA CTCCTCTCGA CGGGATCCAT CGCACTCCAA ATTGGAACAG TGGCCATGAC AGTGACATAG AAAAAGGGGA AAACGTCAAG CACTTGACGT TGCCGAAACG GACAAGCACG GGACATCCAG TGGGTAAGCT TACAGTGAGC ATTGCCGTCT GTGACGAATT TGTTGTTTGG CGAGTTTGTT GTGGGTCGCA AGGAAAAAGC TGCAATTCAA TTTTCCTACC GGATACATGT TTTACCATTC GGGCGACGGC GTTCACTCTT GGTTGGCTGG TAGCAGACAA GGCCTTGGCT GCCTTTGTTC GGCCCCCCGC ATTGGCCGCA CGCCACGCTC GATTCGTTCC CACAAAAAGC TCCATCACCA CGGCCTCACG GACAACCACG AGACTCTTTC GTACGAGTCG GTCGAATGCC ATGCCGCGCG GTGTCAAGAA GGAACATTTG CCTACCAAAA CGTGCGTTGT CTGTCATCGA CCCTTTACCT GGCGCAAGAA ATGGGAGAAA GTATGGGACG AAGTCACCAC CTGCTCCAAA TCCTGCAACG CCAAGCGACG GACGCTAGCC CAGCAGGCCA AGCGAAACCG ATCCAACGAC ACGGCAGAAT CGCACCCGGA CAGCGATATT TCAAACATGT CCGTACCCGA ACCTCACCAA TCCAACGATA CGGATGCCCT CTTGATGGAG TTGTACAATG AAACGGATCG GATCGAGGAC TCACGCCGCG ACGATCGGGA TGAATCGGAC ACTGCCAAAG ACCTCGCCAA GGCGGCACGA AAGGCTGCCA AGAAGAAAGC CAAGGCTGAA CGCCGTGGCC AACGTCAAGG GCGAGCCGAC CCTTCCTACG GACGAAAAGA ATGCACACAG TGCCACCAGA GTGTGGATCT ACTCATTCGA TGCGTCGTGG ACGCTTCGGG GGACTGGGAA ATGGTCTGCG GACGCTGCTG GAAAAGTGTG AGTGGAGGGG TTGTCGACGG AGACGCGGAT CATCCACACT ACCGCTACGG TGGATTATGG AAGAATCGGG CCCGAAAGTG A
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Protein sequence | MEHAEKVCRI RSDKHCDSSL TVYTPLDGIH RTPNWNSGHD SDIEKGENVK HLTLPKRTST GHPVGKLTVS IAVCDEFVVW RVCCGSQGKS CNSIFLPDTC FTIRATAFTL GWLVADKALA AFVRPPALAA RHARFVPTKS SITTASRTTT RLFRTSRSNA MPRGVKKEHL PTKTCVVCHR PFTWRKKWEK VWDEVTTCSK SCNAKRRTLA QQAKRNRSND TAESHPDSDI SNMSVPEPHQ SNDTDALLME LYNETDRIED SRRDDRDESD TAKDLAKAAR KAAKKKAKAE RRGQRQGRAD PSYGRKECTQ CHQSVDLLIR CVVDASGDWE MVCGRCWKSV SGGVVDGDAD HPHYRYGGLW KNRARK
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