Gene PHATRDRAFT_45996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45996 
Symbol 
ID7200856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp895835 
End bp896935 
Gene Length1101 bp 
Protein Length366 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180341 
Protein GI219119149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.216905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACACG CAGAAAAAGT GTGTCGGATT CGTTCCGACA AGCATTGTGA CTCATCACTC 
ACTGTCTACA CTCCTCTCGA CGGGATCCAT CGCACTCCAA ATTGGAACAG TGGCCATGAC
AGTGACATAG AAAAAGGGGA AAACGTCAAG CACTTGACGT TGCCGAAACG GACAAGCACG
GGACATCCAG TGGGTAAGCT TACAGTGAGC ATTGCCGTCT GTGACGAATT TGTTGTTTGG
CGAGTTTGTT GTGGGTCGCA AGGAAAAAGC TGCAATTCAA TTTTCCTACC GGATACATGT
TTTACCATTC GGGCGACGGC GTTCACTCTT GGTTGGCTGG TAGCAGACAA GGCCTTGGCT
GCCTTTGTTC GGCCCCCCGC ATTGGCCGCA CGCCACGCTC GATTCGTTCC CACAAAAAGC
TCCATCACCA CGGCCTCACG GACAACCACG AGACTCTTTC GTACGAGTCG GTCGAATGCC
ATGCCGCGCG GTGTCAAGAA GGAACATTTG CCTACCAAAA CGTGCGTTGT CTGTCATCGA
CCCTTTACCT GGCGCAAGAA ATGGGAGAAA GTATGGGACG AAGTCACCAC CTGCTCCAAA
TCCTGCAACG CCAAGCGACG GACGCTAGCC CAGCAGGCCA AGCGAAACCG ATCCAACGAC
ACGGCAGAAT CGCACCCGGA CAGCGATATT TCAAACATGT CCGTACCCGA ACCTCACCAA
TCCAACGATA CGGATGCCCT CTTGATGGAG TTGTACAATG AAACGGATCG GATCGAGGAC
TCACGCCGCG ACGATCGGGA TGAATCGGAC ACTGCCAAAG ACCTCGCCAA GGCGGCACGA
AAGGCTGCCA AGAAGAAAGC CAAGGCTGAA CGCCGTGGCC AACGTCAAGG GCGAGCCGAC
CCTTCCTACG GACGAAAAGA ATGCACACAG TGCCACCAGA GTGTGGATCT ACTCATTCGA
TGCGTCGTGG ACGCTTCGGG GGACTGGGAA ATGGTCTGCG GACGCTGCTG GAAAAGTGTG
AGTGGAGGGG TTGTCGACGG AGACGCGGAT CATCCACACT ACCGCTACGG TGGATTATGG
AAGAATCGGG CCCGAAAGTG A
 
Protein sequence
MEHAEKVCRI RSDKHCDSSL TVYTPLDGIH RTPNWNSGHD SDIEKGENVK HLTLPKRTST 
GHPVGKLTVS IAVCDEFVVW RVCCGSQGKS CNSIFLPDTC FTIRATAFTL GWLVADKALA
AFVRPPALAA RHARFVPTKS SITTASRTTT RLFRTSRSNA MPRGVKKEHL PTKTCVVCHR
PFTWRKKWEK VWDEVTTCSK SCNAKRRTLA QQAKRNRSND TAESHPDSDI SNMSVPEPHQ
SNDTDALLME LYNETDRIED SRRDDRDESD TAKDLAKAAR KAAKKKAKAE RRGQRQGRAD
PSYGRKECTQ CHQSVDLLIR CVVDASGDWE MVCGRCWKSV SGGVVDGDAD HPHYRYGGLW
KNRARK