Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45980 |
Symbol | |
ID | 7201047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 845268 |
End bp | 846314 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180131 |
Protein GI | 219118728 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00043599 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCAT CGGTAAGCGA TCCTCTTGCG ACACACGGAA TGCTCGTGTT GAGTATCCTC TCGGCGGCAG CACTTGTCGG AAGTGTGTTT TACATATTTT ACCCCGCTGT GGAGGTGTTT CGACGGGGTG CCCGAGGCAA GGACACCCTA GACGTTCTAC AAAATGCGGA ACGAGTTTCT GCAACGAACC CACCATTGAT TTCTATCATT ATACCTGCCT ATAATGAAGA AGAGAGAATC ACGATTATGC TGCAAGAAGC CTTCGACTAT CTATCCTTGA AATCCTGCCC GGCGTTGGAA TCTCTGAGGC AGGCGGTTCG TCACTACAAT TCGCTCGCCA CCGTCGATTC GCGAACAATC GAATGGATTG TTGTCAACGA CGGTTCGACT GATCAAACAT GCCAAGTCTA CGAATCGTTT GTAAGGAATA TTCCGAAACA ACAAACACCC ATGACTTGGA AGTGTCTCAG TCTAGCTCGC AACTCTGGCA AAGGGGCGGC CGTCCAGGCC GGCATGCTCC GGGCGAAGGG ATTGTTTCGT CTCATGGTTG ATGCTGACGG CGCGACGTCG TTTAGACCGG GTTTAGAAGC CGTCACTGCT TCGTTGCAAG GAACACAAGC GCCCATCGTG TTTGGGAGTC GCGCACACTT GGAGCAAACG GTCCAACGCA GTTTCGTGCG TACAACCTTG ATGAAAGGCT TTCACATCCT CGTTGAATGG CTTGTTGGAG CTCACGAAAT TCGGGATACT CAGTGTGGCT TCAAGATCTT TCGAGACGAT GCCGCTGCCG TTCTGTTTGA GACCTTGCAT TTACAACGCT GGGCCTTTGA TACGGAACTC GTCTTTGTCG CGCATCGACT CCAATTGCCC ATGCAAGAAG TGGCTGTACC CTGGCACGAG GTAGAAGGCA GCAAACTGCA TACCAGTGCG TTTTCGCTCA TTGTGGTCGC GGTTCAGATG CTGCGCGATA TGCTCTGCGT GCGGCTCTGC TATACGTTCG GACTCTGGAA GGTTGTAACC TTACAACCAG CCTCGAAAGA GGACTGA
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Protein sequence | MSASVSDPLA THGMLVLSIL SAAALVGSVF YIFYPAVEVF RRGARGKDTL DVLQNAERVS ATNPPLISII IPAYNEEERI TIMLQEAFDY LSLKSCPALE SLRQAVRHYN SLATVDSRTI EWIVVNDGST DQTCQVYESF VRNIPKQQTP MTWKCLSLAR NSGKGAAVQA GMLRAKGLFR LMVDADGATS FRPGLEAVTA SLQGTQAPIV FGSRAHLEQT VQRSFVRTTL MKGFHILVEW LVGAHEIRDT QCGFKIFRDD AAAVLFETLH LQRWAFDTEL VFVAHRLQLP MQEVAVPWHE VEGSKLHTSA FSLIVVAVQM LRDMLCVRLC YTFGLWKVVT LQPASKED
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