Gene PHATRDRAFT_45931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45931 
Symbol 
ID7201012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011676 
Strand
Start bp699926 
End bp701258 
Gene Length1333 bp 
Protein Length311 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002180099 
Protein GI219118662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGAGGTCGTA ACTGTGTATT ACGTACTACA ACTTCGCAAG CGTGCCACCG ACCTTTTGTT 
TTTCAAACAC AGTATTCTCA TAGTCTCAGG GACCGTTCGT ATCGCATCTC CATCCCTAGC
AGTAAACAGC CATCATGAAA CGGGATACTA GAAAAGCTGG AATCGACGCC TTGGCGGGAG
CTTCAACTGA CCGAGCACTT TCAATCAAAA GCGTCGATCA AGAAAAGGAG AAGGATCTGT
CCGAACTCCT CTTGCAAGCC GACTTTGCCG CTATCGAGTC TCGCCTGTGC AATCTGACGA
GCTCCAGCAG CCTACTGTGC CGACCAAGCC TCTTTTACGA ACTTTGCCGT ACTCGCAACG
TCCCACTTTC GACCTTACAA GCTGCCGCAG AAGCATGGCC GTCGACCGTA GAGTATATTG
ACTTCCATTC TGAACGAACT TCTTTACACG AGCTACTCTA CCACGATCCA GAATGCAGGT
CAGTTCAATT CTTAATACAG CAGAATCCTG CGGCTACGAC ACGAATAGAC AAGGAAGGAC
GCTTACCACT ACACCTGGCA ACCGCTCTGG CATCTTCCGA TTCTGGCTTG GTGACACTGC
AAGCCAATGT GCAAGCCGCA TGTTGCACCA ACAATCGAAT GGAAACACCG CTACATCTTG
CTTGTCAACG ACGCGATATT TCGTCCAGTC TGGTTTGGAA TTTGATTCAG TTAGCGCCAG
AGTCGTGTCG GACACTCGAC GTCAGTGGCC GTTTACCGAT CCGTCACGCA TGTGAAAATC
TCGCTGATCC CTCCACCTTG TTGATTTTGT TAAGAAGCTA CCCGCAATCA TGTCAAGTTT
ACAATCCCCG AGGACTCAAG CCCTACAGCA TTTTACGCAA ATCATGTTCT CACGGCTTGC
CCGCTCGCGA TGCTCGGTGC CTACTTTTAC GAAAGTTCAT TCAGTTACAG AGCGTCAAAA
CCAGCACGAA AACACGCAAC ACTCTGAAAT TTTTCTGGCA TGATATCCAT TCCTTCCACC
GCAAAGTGTT ATCGCAGGGA TTGCGAAAGC ATGCTGGAAA GTCGGTCTAA TTAGGTTGCG
CCGCGAAACA CTGTCAACTT GATTCGCTTC TAATGCGGTG ACAAAATATC TCGTATTTAT
CTGACCCCGC GCAGATCAAG AACTGCATCC AGACTTCGCC TCGCTGTCGT TTCTGAGGGA
TTGGTTTTGT GTTGACCATG AGTGTAATCG TGTAAAAATG GGTAGACATG CTTCAGGTGG
AGTGAGTTGG GTTATTGTTT ATTGCATATT CAAAGCGCTA CTCTAGCTAG CTAGAAGGAA
GTCTTTCAAA TTC
 
Protein sequence
MKRDTRKAGI DALAGASTDR ALSIKSVDQE KEKDLSELLL QADFAAIESR LCNLTSSSSL 
LCRPSLFYEL CRTRNVPLST LQAAAEAWPS TVEYIDFHSE RTSLHELLYH DPECRSVQFL
IQQNPAATTR IDKEGRLPLH LATALASSDS GLVTLQANVQ AACCTNNRME TPLHLACQRR
DISSSLVWNL IQLAPESCRT LDVSGRLPIR HACENLADPS TLLILLRSYP QSCQVYNPRG
LKPYSILRKS CSHGLPARDA RCLLLRKFIQ LQSVKTSTKT RNTLKFFWHD IHSFHRKVLS
QGLRKHAGKS V