Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45868 |
Symbol | |
ID | 7201106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011676 |
Strand | + |
Start bp | 513909 |
End bp | 515491 |
Gene Length | 1583 bp |
Protein Length | 475 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002180064 |
Protein GI | 219118589 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CATCGTTCAC AGTCGTCATC CCGTGAATCG AGTCTTACGG GAGACCGTCC TACTTTTCAT CTCGTTGGTT TGGACCAAAG ACTGTCGAGA GAGTTGTGCG CTGCCCACTG TTCACCGGGC AGTTTTGTTC CGGCTAACTT GGTCTGGGTT TCATCATGCC GTCGAGTTCC AATCACCAAA CGCATCACCG CGAGGCATCT CCACCTCACA AGCACCATCG AGTGCACGAT ATGCTGGCCG CCCTCTCCTT CGAACAGATC TTTCACCATC ATCCTCACGA TCACGGTCGT CCCCATGGAT GGAACAATCC ACACAATTCT CAACATTCGA ACGATAGTGA AGCGCTACAA ACCACGGCTC CGGAGAGCGA ATCTTCCCGT CGCACTCTTC CTTCCAAACA TGCTCTAACT AAACTTGGCT CCAAAAGAAC CAAGCGACGC TCCTCGGCGC ACCTTCAAGT CAATCACATG ATGCACGGCA CATTGGATCC GGAAGGGCAC GTCGAAGATG TATTCTTCGA CGCCCTACAG TTTGGTGATC ATCCCGATAA CCCGGATGAA TTCAAGGTTG TTCATCTTCG TGAATCCATT ACGATTCCTA GTATTCTCGT AGATGCGGAT GCCATCGAAG CCTACATCCA GCATAATTAC CAGAATGATT CGTCGCTGCA CGAAGACGGA GATACGTCCG AATCCGTCTC GCCACTTTCA CCATATCCAA CTGTCATCAA CGATCGAACA ACCGAAAGCG GGTGGTCAAG GCCCTCAGCG CCCCCGCCCC CGCCCGACGA ACTCCCTCTT CGATTTTTGC GGGCCGGCAA GGGCGACGTG GCCGAAGGGC TACGGCGCTA CCACGCCACC TTGCAATGGC GAGCCAACCT GGGTATGGAT ACAATACTTC GCGAACCTAA CGAGGACTTT GATTTGATCA AATCACATTA CCCCGCCTTT TATCACGGGC GCGCCAAATC CGGTCAACCC GTCTTTTTCG AGTGTCCTCC CCGGACTAAT CTCAAAGCAC TCCGCCGAGG TGGCGTAAGC TTGGAAAAAC TCTTACGGTA CTACGCCATG CTGACCGAGT TTGGTTGGCA GTACGTGGAA CGGGATGACT TGGCGCGGAG TGTGTATGTG ATTGATTTGC AAGGGATGCG GCTCGGCGAT TTTGTCGGGG AAGTCATTGA TTTCGTGAAA AAAGCGTCGG CCTTTACTTC GCAACACTAT CCAGAACGGG CGGGCTACGT TATGGTCATA AACGTACCTT CGTGGTTCAA GCTTATTTGG AATGTCGTTA AATCGTTTGT GGATGAAGTC ACGTTAGACA AAATTTCCAT TTTAAGGGGA TCCGCCGAGA TTCAAGCTCG CATGCGGGAA CTCATTTCGG TCGAAAACAT TCCGTCCGAG TACGGTGGTA TCAGCACGAC GCCCTTGGGA GAATCCAAGG AAGAACATCT CTTACGAGAT TTGATCCGAC ACAACAACGC CTTGGCCAAA GTAGCCAAAG GTGAGGAGTA TACAGTATGC AACGGTGCCC ACGGCAATCC GCCTTGTCGC TTTTGTAGTT GGGTACCGGC TCGAAGCTAC TAG
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Protein sequence | MPSSSNHQTH HREASPPHKH HRVHDMLAAL SFEQIFHHHP HDHGRPHGWN NPHNSQHSND SEALQTTAPE SESSRRTLPS KHALTKLGSK RTKRRSSAHL QVNHMMHGTL DPEGHVEDVF FDALQFGDHP DNPDEFKVVH LRESITIPSI LVDADAIEAY IQHNYQNDSS LHEDGDTSES VSPLSPYPTV INDRTTESGW SRPSAPPPPP DELPLRFLRA GKGDVAEGLR RYHATLQWRA NLGMDTILRE PNEDFDLIKS HYPAFYHGRA KSGQPVFFEC PPRTNLKALR RGGVSLEKLL RYYAMLTEFG WQYVERDDLA RSVYVIDLQG MRLGDFVGEV IDFVKKASAF TSQHYPERAG YVMVINVPSW FKLIWNVVKS FVDEVTLDKI SILRGSAEIQ ARMRELISVE NIPSEYGGIS TTPLGESKEE HLLRDLIRHN NALAKVAKGE EYTVCNGAHG NPPCRFCSWV PARSY
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