Gene PHATRDRAFT_45839 details

Gene Information

• Locus tag: PHATRDRAFT_45839
• ID: 7200951
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011676
• Strand: +
• Start bp: 441739
• End bp: 443778
• Gene Length: 2040 bp
• Protein Length: 563 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002180047
• Protein GI: 219118554

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACCGGGCGAA GCGATGGACA TACATTATTT CGCCTCGTAA AGATAGCACT CCCGTTTTTC 
ATTCACATTC GCATCGCGTC CACACGATCA CGAGTCGAAT TTGAAAGTGT TGGAAAAGCA 
GCACTGTACG TCACGCAGTT CCTCGAGGCA TGGTTTCCCA GGAATATGAG ACATTCGCCG 
ACAAGCTGCC TCAGGCGAAC GAGAACATAT GTGACTCTGC GGATCCTGCG GCGTCTCGTC 
GAAATTCATC AGAGGAAGAA TTGTCCGACG ATTTGCCTGC GGATGACCGA ATTGAAAGGA 
GAGTACGGCA AGGAGCAATT TTGCCCTTGT CCATGAGACT CGTGATGCAA ATCTCTGGTA 
TTGGCTGTTG CCAGGAATGC ACCGGAAGCA TGGCTCTTCC TGGCAGCAAT TCCATCAACA 
GAAACGGAGA TGACGCTAAT CACGAAGAGA CTGCTCTACT GGGCGACTAC GATTTGCGTG 
CCCTGCGCCG TCAAAAGTCG GCCATCTCCC CCCTGGTAGT TGGACCCATG ATGATGCCAG 
GGAATATCGA CAAAGAAAAT TCACTTTTGG AAAGAATTAT TTCAGAGTAT ATTGCCTCCT 
GCCGCTTTTA TGGCTGTACG GACCGGGTCA ACGCAGGTGT GCTGACTACT TTACGGTTCT 
CCTTACCCAG TTTACGGGTC AGCGGAAGTT TCCACGATGC TGATATGCTA GCTTTGGCCG 
AAATCATGAT TAAGTACGGG AACGGTGCTT TGCGCTATAT CAAACGATTA GACTTTTCGC 
TGAGCTCCAA AGAAGGAAAG CTGAACGGCA AGGCAGGATT TCGTTCTCAC GGGGCCTTTA 
CGCTGGCAAA AATACTTCAA ATTTCTGACT ACATTGAAGA AGTTTTCGTT GACAGGAATC 
GTCTGGGTCC GTACGGTGCC TCTGCTTTAT TCATCGCCTG TTCTTCAAAT TCATCCCTCA 
AAAGGTTGCT GATGAGACGT TGTCGCGTTC GAGAACGAGG GGCTTTGGCC TTTGCAGAGC 
TAATATCGAC GAGCTCGGAA TGCGGCTTGG CGGAAGTAGA CCTTAGTGCG AATGGAATCG 
GTTTCAAAGG AAGTGTGTCC ATTGAGCGTG CAATTGTGGA ACGCAACCAG AACTCTGATT 
TACCAGCTTT AATTGTGAAC ATGGAAGGCA ATCTAGTACT CCAAGAAGTA CTCAATGGCG 
TGACTCATGG ATTGGGAATC ATTCTGGCTT TGATGGGCTC GTCACTTCTG TCCAGCAGCG 
TCCGACACCA ACCATCCCGT CATGTCGTCA GCTGTGCAGT ATACTCGACC AGCCTGATTG 
TTCTGTATAC CAGTTCTACT CTGTATCATT CGTTTTTTAT GTGAGTATTG CCAAGGTTGC 
CGAGCTTCTG CTTGTTTGAG AAATCCCGAT TGTCTGAGGC TGGATTCTCT CATACCTTGC 
TTTGCTTATA GCTTGCAAAA CACCAAGTAC ATTTTCGAGG TCATGGACAA GTGCGCCATT 
TATATACTCA TTGCTGGTAG CTATACCCCA TTCCTCCAGA TCGTCCTGCA GCACGACCCA 
TTGTGGGCCA ATGGGCTCTT GGCCTTCATT TGGTGTTGCT GTCTGCTGGG AATCTCAGTC 
GAAGCATTCT TTCCAACCTA CAAACACAAG GGTCTGTTTT CGCTCGCTAT GTATCTGGGC 
ATGGGATGGT GCTGTATTGT TTGCTTACCA GAATTTTCCC GCATCGTTCC TACTCGCTTG 
ATCCACCTCG TGATTCTGGG TGGCGCCGCC TACACTCTGG GTGTCCCCTT CTTCGTTCGC 
AACAACCATC TCGACCACTG TATTTGGCAC ATTTTCGTCA TGGTGGGCAG TATATTCCAC 
TGGTGTGGCA TTTACTTTTA CGTCGCCACA TTTGATGACG AGTTGGCGTT GGCAAATGCT 
TCTTCGTCCT AACAGCAAGA TGAAACACAG GCCTGCCGGT TTCTCACTCG GAGCAAGAGC 
TGCACGATGC AGGCAACATA TGTTCGAGCA AAGATAAAAT CTAGTCCAAA AAATAAGGTT 

 

Protein sequence

MVSQEYETFA DKLPQANENI CDSADPAASR RNSSEEELSD DLPADDRIER RVRQGAILPL 
SMRLVMQISG IGCCQECTGS MALPGSNSIN RNGDDANHEE TALLGDYDLR ALRRQKSAIS 
PLVVGPMMMP GNIDKENSLL ERIISEYIAS CRFYGCTDRV NAGVLTTLRF SLPSLRVSGS 
FHDADMLALA EIMIKYGNGA LRYIKRLDFS LSSKEGKLNG KAGFRSHGAF TLAKILQISD 
YIEEVFVDRN RLGPYGASAL FIACSSNSSL KRLLMRRCRV RERGALAFAE LISTSSECGL 
AEVDLSANGI GFKGSVSIER AIVERNQNSD LPALIVNMEG NLVLQEVLNG VTHGLGIILA 
LMGSSLLSSS VRHQPSRHVV SCAVYSTSLI VLYTSSTLYH SFFILQNTKY IFEVMDKCAI 
YILIAGSYTP FLQIVLQHDP LWANGLLAFI WCCCLLGISV EAFFPTYKHK GLFSLAMYLG 
MGWCCIVCLP EFSRIVPTRL IHLVILGGAA YTLGVPFFVR NNHLDHCIWH IFVMVGSIFH 
WCGIYFYVAT FDDELALANA SSS