Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45633 |
Symbol | |
ID | 7200398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 776482 |
End bp | 778002 |
Gene Length | 1521 bp |
Protein Length | 409 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179713 |
Protein GI | 219117852 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.75822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGACTGTAAA CTAGGTCGAG AAAAGGAATA GAACACATTA GATTGGAGCA TCGTCTGGAT CAATGGAGTG TGTCCCTCTA CAAATTAGAA GTGCAGGAGA ATGGGCCACC TCCTTGTGTT ATACTGTATT TGATAGCTTC TTGGCGAGCA GCAACAGCTT GGGTGGAATG TGAGAGTGGA GGCATCTGCC CTGACGGCAA CACATGCTGC GAAAAGACCG CTACTGCTAC TGTTTCGACT AAGAAACATC ACGGTTCGGT CTGTATCTCG GGGAGCGTAG GAGACATCGG GATGTGCTGC AATGACGAGG CGGTTACCGG TTGTCACGGT GGCTTTACAT GTGCCAACGG TACTGCCAAA GAAAATTTGA CCACTTCTTA CTACTGCGAG CGCCTGGATA AAACGGATTA TTCTCTGCCC AATCGTGTAC CACGATACAC ATTGTGTTCG GTCCCTGGAC CCGTACTTCA AACAATCCAT GGATTTTCTG TCGTCGATAG CAATCCCAAC AAACCGAAAT TGGCGTATTT ATCGACGATG GGTGCCATTG ATTCAACCAG TCCGGATATT CTGAATTTAC ATGCTCGAGT GCAGACGGTA ATAATTGTGG TGCACGGTTC CAGTCGCAAC CCCGACGATT ACATTTGCTG TACCAATGCT GCTTTGCCCA GCTCCGAGCA GTTTCCAACG AACTCAACGA CCATGCTGAT TGCTCCCTGG TTTTTGGCCC CCCGAGACAA CGTTACCGAA GTGTTCAACT TTGACGGATC CACATCGGTT CCACTCTATT GGTTTGTAGA TGGACCACAC TACCATACGT GGCGGTTTGG TGCAAATGCA CTCAACGCTA ATTTGAGTTC ATACACTGCC ATGGATACCA TCGTAAATCA CTTGGTTCAA GACTTTCTCC GGTTTCCACT ACTCGAACGA ATTATTGTTG CGGGTCACTC GGCCGGTGGT CAGTTGGTTC ACCGCTGGGC GGTTCTTTCC GGCAGTCACG CGTTTGCGGC GTCTCTTCAA CACAACTTCC GCTCGCGACC AGTAGCAATA CGCGTGGTCG TTGCGAATCC AAAAAGCTAC TGCTACCTGG ACGGACGACG ATTCATTGAC GGAGAGTTTC GACTACTTGT ACAGGATGAG AAAGCAGAGT GCTTACCCTA CAACGAGTGG CAATGGGGGT TAGATGATGG CCCGTTCTTG TCCATACCGT ATAGGGATGA AGCTTTCGCA TTGGCAGGGG GGAGGGCCAA AGTTGTCGCT CGGTACGCAA TGAGAGATGT TGTATACTTG TCTGGCGAAC TTGATATTTT GCCCAACGGT AACTGTATGG CGCAGCTACA AGGAGCCTAT CGAAAAGAAC GCAGCGAGCG ATACTTTGCG TCTCTCAAGA AAATATATGG CTGGCAACCT CACCGTCGTC TGGTGGTATC GCAAGTGCAC CACGACCACT GCCTTATCTT CCAGAGTCCC GAAGGACATC GGGCTTTTTT TGAATCCTAT GAACAGAGCT ATATACTGTA A
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Protein sequence | MCCNDEAVTG CHGGFTCANG TAKENLTTSY YCERLDKTDY SLPNRVPRYT LCSVPGPVLQ TIHGFSVVDS NPNKPKLAYL STMGAIDSTS PDILNLHARV QTVIIVVHGS SRNPDDYICC TNAALPSSEQ FPTNSTTMLI APWFLAPRDN VTEVFNFDGS TSVPLYWFVD GPHYHTWRFG ANALNANLSS YTAMDTIVNH LVQDFLRFPL LERIIVAGHS AGGQLVHRWA VLSGSHAFAA SLQHNFRSRP VAIRVVVANP KSYCYLDGRR FIDGEFRLLV QDEKAECLPY NEWQWGLDDG PFLSIPYRDE AFALAGGRAK VVARYAMRDV VYLSGELDIL PNGNCMAQLQ GAYRKERSER YFASLKKIYG WQPHRRLVVS QVHHDHCLIF QSPEGHRAFF ESYEQSYIL
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