| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45592 |
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| Symbol | |
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| ID | 7200642 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011675 |
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| Strand | - |
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| Start bp | 637343 |
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| End bp | 638863 |
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| Gene Length | 1521 bp |
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| Protein Length | 452 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | 2-hydroxyacid dehydrogenase |
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| Protein accession | XP_002179886 |
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| Protein GI | 219118213 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGGAG CAAATCGAGC AACATCGGTG GCTGTTGTGC ACGCCGCCAG CCGTACTCGA
GCAACCTTGC CGGCCATTCA ATTTATCTCA GTCCGCACAT TCGCCGACGT CGACATTGAG
CATGGTCGTA AAGAGTGGAA AATACTGGGC GATCTCAAGA ACTACAAACC AAGCCGCAAA
AATGTAATCA AAACCTTCAA CAAGATTTCT CCTATTGGCT TGGGCGATTT CCGACCGAAC
GCTACGAAGT TCGTCTCCAG GACGAGGAAG CCCCGTCGGC GCACGCTATT TTGCTCCGTT
CGCACAAACT TAAAGAGGAA GAGGTACCGC CGACGGTTCG CGCTATCGCG AGGTAAGCCA
TCATAACGAA TTTTTTACCA TGTTTCTGTT TTGCGGAAGC AATCTCATCT AACGGGGTTT
CTGAGTTCGT TCTTTAGATG TGGTGCTGGT ACAAACAATG TACCCGTTGC TCGAATGACC
GAACTGGGAA TTCCTGTGTT CAACACGCCA GGAGCCAATG CCAATGCTGT CAAGGAACTG
GTGTTATGCG GTTTGCTTCT TGGAAGTCGT CGTGTGGTGG ACGGCATCAA TCATATGAAG
GATCTGGGAA ACCAAGGTTT AGCTAGGGAA CGCGTTGAAA AAGACAAAGC CATGTTTGGT
GGTCGTGAGA TCAAAGGGAA AACACTTGCC GTGATTGGAC TTGGTCATAT CGGATCAATG
ACTGCCCGAG ATGCCGCTGA ACTCGGTATG AACCTGCAGG GGTATGACCC CGGTCTCTCG
GTACAGTCTG CGCTCAAGCT GCCGACCTCG ATATCACTTT GCGACTCTAT CGCAGCAGCT
GTCGCTGGGG CAGATTATAT CAGTATTAAC ATTCCGTACA TTAAGGGTGA AGGGGGAACG
CATGGCATTA TCGGAAAAGA CGTGATTGAA AACTTCAAGG CGGACGCAGT TTTGCTGAAT
TTCGCTCGCG GTGAATTAGT CGACTCTGAA GCTATGAAAG TGTTCTTGGA CAGTGGCAAT
GGTCGATATG TTTCCGATTT TCCCGATGAT TTGTTGTGGG ACCATAAAAA TGCTGTGATT
CTTCCCCACC TAGGAGCGTC TACTGAAGAA GCAGAGGACG CTGCTGCGTC CATGGCCGCC
GACACTATTC GTGATTTTTT ACAAACTGGT GCCATTCGCA ACTCGGTGAA CTTCCCTACT
TGTTCTCTAG GTGAATGCTC AGGTAGTACA GTGCGTATTA CCGTGGTCAA CTTAAATGTT
CCCGGGTGCC TTGCCAAGAT TACGGATGCC GTCGCCAGTG AAAATTTCAA CATTGTCCAG
CAAATTAATC AGTCGCGCGG TAACATCGCC TACAGTGTCC TTGATATCGA CACAGAAGGA
CATAATGCTG TCGCAGATTT CAAATCAGTG CAAGAGAAAA TCACCATGCT GGAGGGCGTA
TTGTGCAGTC GCATCATTTA CGAAGGAAAA ACTCCGGGAA CTGGGTTCGC CAAGAATCTC
GAGGGAGAAT ACTTCGTCTA A
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| Protein sequence | MLGANRATSV AVVHAASRTR ATLPAIQFIS VRTFADVDIE HGRKEWKILG DLKNYKPSRK
NDEEAPSAHA ILLRSHKLKE EEVPPTVRAI ARCGAGTNNV PVARMTELGI PVFNTPGANA
NAVKELVLCG LLLGSRRVVD GINHMKDLGN QGLARERVEK DKAMFGGREI KGKTLAVIGL
GHIGSMTARD AAELGMNLQG YDPGLSVQSA LKLPTSISLC DSIAAAVAGA DYISINIPYI
KGEGGTHGII GKDVIENFKA DAVLLNFARG ELVDSEAMKV FLDSGNGRYV SDFPDDLLWD
HKNAVILPHL GASTEEAEDA AASMAADTIR DFLQTGAIRN SVNFPTCSLG ECSGSTVRIT
VVNLNVPGCL AKITDAVASE NFNIVQQINQ SRGNIAYSVL DIDTEGHNAV ADFKSVQEKI
TMLEGVLCSR IIYEGKTPGT GFAKNLEGEY FV
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