Gene PHATRDRAFT_45558 details

Gene Information

• Locus tag: PHATRDRAFT_45558
• ID: 7200740
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 544327
• End bp: 546484
• Gene Length: 2158 bp
• Protein Length: 534 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002179669
• Protein GI: 219117760

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.402088
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTGTCGATG TCTACTGCTT CACTTACTAC CAACTTGATA AAAGATGAGT GAGGAACGCC 
TCAACCAGAA AACTATAGAC GACATGGCCT CTGAAGTTGC ACACCTACAC AGTACAAACA 
CATCTCCACA CAGTCCATCG ATACACGCGG CTGGAACAGA TCAGGGCGAT CATGCCTATT 
TTGGCGTTGA TCAGATAGCG TGCATGGAAC CGATTGGCTC AGAGTTCCGG CGAGAATCTT 
TTTTGACTGA GTTTTCCCAG TCTCGAGGTC CACCCCAAAT TGTACTCTTG ATTATTCTAC 
TGGCTCTAGG ATTTGGTTCG ACTATCGGTG TGGTGGGTCT TTTTGAGATT TAGATTTAGG 
CCATTCCAAC CTGCTGATTC TCACCGTACA TCAATCATCA CCCTTGCAGG TACCTGCAGT 
AATGACGGAT CGATATGCGC GCCTTAATCA TGACTATTCC GACCAAACCT ACTGTGCTGA 
CTATTCGATG AACGATAAGC CAAAGGCATG TTTGCTTGGG TCTGCCGATG CGCAGAATGC 
CGTTGCGTTT GAGCAACTTA TTTCGAATAT CTTTACTTTC TTTACAAGCT CACTGATAGG 
ATCTCTTAGC GACGAATACG GCAGAAAAGG TTCGTGCGAC CTAGATCTAT GTTATTAAGT 
GGCCTTGCTT GAAAAGTTCT GATTCCTTCC ATTATCATAT GTAGGAATTC TGACGTTGGG 
AGTCCTCATG TCGACCATGT CTCCCCTTTG TCTGTTGCTC ATACAGCTCC GGCCAGAAAT 
GAGTCCCTTT TGGTACTACA CCGTTGGCGC TGTTCAGGGG TTGATCAGTT GGATCACCAT 
TGCACTTTCT GCACTTTCGG ATGTCATGCC TCCCAAATGG CGAGCGCCAA GTTTTGGCTT 
ACTGCTAGCA GGCTTTTCCT TGGGATTTGC CATGGCTCCC CAATTGGCCC TTATTCTTGG 
TCATTTTTAT GTCACTGTCG TTTCTCTCTT CATGGTTCTG TCGGGATTGC TTATTGTGGT 
GTTTTTCTTC CCCGAAACTT TGCGCCCCGA AACGGCGCGC GAAGCCCGTC GTGTGCGTGA 
AGCGCAAGTG GAGGATCTTT CTGCATCAAA ATTAGCACTA TCAAATATTT TGAGGCCGAT 
GAGGGAGCTG TCTATTCTAA ATCGAAACCG CCTTTTCCGT TTGTTGTCGC TTTTGGCATT 
TTTTAGTGGT CTGGTAACCG CAGGAGACCG AACACTTCTT ATTTACTACA TTGAAGAACG 
TTTAGGCTTC GGCGACAAAG ACATTGCGAC CATGTTCATG ATCATGGGCG TTCTGGGTAT 
ATTTGTCCAG GGCGTCGTCT TGAAATTACT GAACGAGGCT ATTGGAGAGC GAATGGTTGT 
CACATTATGC TTCTGCCTTG GATCATTTCA CAATTTGCTT TACGGCCTCG CCAAAGACAA 
AACCACTATC TTCCTTGCGG TTGCCATTTC TGCCTTCGGG GGGATGGCAT TTCCGACAAT 
TTCTGCGATC AAGGCCAACA ATGTTGTAAG TCGATGAAGA ACAAAATTGC TCTGCAGAAT 
CTTTGGTGGA ATCACTTACC TGATCACGTG AGTTGCACAG AATGAGTCCG AGCAAGGCAG 
AATTCAAGGA GCACTTTTTT CACTCCAAGC ACTCGCATCA GCCACTGGTC CCATGCTTCT 
TCGATTCATC TACCATCTCA CAAAAGACGG TGCCTTTCTC GGTCCTGGTT CAATGTTTGT 
AGTGGCTTCG GGAATATACC TGATTGCGGT ATATTGCGCT TACTCTCTGC CGGTCAGTTT 
AGTCGCAGTC CAAGAAGAAC GAATCTCTAC TTAGTCCATG ATTCTCACCC ATTGACGTGT 
CTCATTTCAG GATGAAGCAA ACTCGCTGCG CAAAGAGAGG CCGTTTGCCG ACGTTGATAT 
GGACGAACCC TCTTCAAATA TGCCTCTATT ATAGCTTCGT GGCGAGACTA TATACTTTGA 
ATTTCGTTCG TTAATTTTTA GAGGATTGCT CCCAGAAGAA GGTACTCAAG AAGGTTTAAA 
AGGTAATCGT CCAGAGTTTA TCGGATCCTA TCGAAGTCGT CAGTTCTGCA GCCAGAATGC 
CATATCTTGG AGCAAATACC CCTAAGCTGG TAAATGCTAC CTCTATGCTA TACCTTCG 

 

Protein sequence

MSEERLNQKT IDDMASEVAH LHSTNTSPHS PSIHAAGTDQ GDHAYFGVDQ IACMEPIGSE 
FRRESFLTEF SQSRGPPQIV LLIILLALGF GSTIGVVPAV MTDRYARLNH DYSDQTYCAD 
YSMNDKPKAC LLGSADAQNA VAFEQLISNI FTFFTSSLIG SLSDEYGRKG ILTLGVLMST 
MSPLCLLLIQ LRPEMSPFWY YTVGAVQGLI SWITIALSAL SDVMPPKWRA PSFGLLLAGF 
SLGFAMAPQL ALILGHFYVT VVSLFMVLSG LLIVVFFFPE TLRPETAREA RRVREAQVED 
LSASKLALSN ILRPMRELSI LNRNRLFRLL SLLAFFSGLV TAGDRTLLIY YIEERLGFGD 
KDIATMFMIM GVLGIFVQGV VLKLLNEAIG ERMVVTLCFC LGSFHNLLYG LAKDKTTIFL 
AVAISAFGGM AFPTISAIKA NNVNESEQGR IQGALFSLQA LASATGPMLL RFIYHLTKDG 
AFLGPGSMFV VASGIYLIAV YCAYSLPDEA NSLRKERPFA DVDMDEPSSN MPLL