Gene PHATRDRAFT_45119 details

Gene Information

• Locus tag: PHATRDRAFT_45119
• ID: 7200313
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 257247
• End bp: 259321
• Gene Length: 2075 bp
• Protein Length: 591 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002179167
• Protein GI: 219116745

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.170034
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTTGGGAAA GCAAAGGCCA TTGAGGTCCA CACCACAAAA ACCGCTCGCG ATGCCTTCGA 
TATCAGCTAG TGTAAAGCTG TCGATTCTCT TAGCATGTAT AGCTTCGTTG ACATCACCGG 
CTCTGAGCTT TACACCGCTG CTGTCGAGCC TTGCTGCTTC GGTTTCCAAG CTACAGGCTC 
CCCGAAGCTC CGTCTGCTTG AGCAAGCGTT CGTCTCCTTC TCGATCCAAC GGAGCGCTGA 
CCATGCACAT GGGTCACAGC CATAGTCATC ATATTCACAC TCATACCGAA GAGCTCAAGA 
ACAAGCAACT ACAAACGAAA AAACGCCGAC GCCGTGCGGC ACTCTTTCTC TTCACGGCCC 
TCGCTATTCT GGGACCGCCG CTATTTCGTC AACGCACGCT AACACGGACT GATGTGGGGA 
CGTTTCTGTT GACATCCACT ATCCTTACCA TGAGTGACAC CGTACGTCGT AAAATTCAAC 
ACGCCATTCG GAAAATAGGA CAATTGCGTG AAGGCATTGT CAAGCATTCG TCACCCGTAT 
CTCCGGGAAA ATTTCTCAGT TACCTTTTCC GGAACGACAA CGCGGCTGAT CGGGTAACGC 
TTTTGGGCAG TGTGATCAAC TTATTTTTGA GTGCGGGAAA ATTTGCCGTT GGCGTGTCGT 
GTCATTCGAG CGCTTTGATA GCGGATGCCG GGCATTCGCT GTCGGACCTC TTTAGTGACT 
TTATCACCCT GTGGGCGGTG CAAATCGGTC GTTTGCCTCC GGATGATGAT CATCCGTACG 
GACACGGAAA ATTCGAAGCC ATCGGCTCCC TGTTCCTCTC ATTGACCTTG CTGGCGACTG 
GAATATCCGT CGGCGCGGCT TCCAATCGGA AACTCATTGA AATCATCACT ATCCAACGAG 
CGTCCGGCTG GGGTACCGCG GCATCCCTAG CTGGACAAGT GCCTACTTCG CCCGCTCTGT 
TCATGGCTGC CCTCAGCATT TTTTCCAAAG AATGGTTGTA TCGTATTACA AAGCAGGTTG 
GAGATAGACT GAATTCGCAA GTGATTCTAG CGAATGCCTG GCATCATCGA TCCGATGCGT 
ACTCGTCTGT TCTTGCACTC TTGGCGATTG GGCTAGCGAT GTATTTTCCC GCGATGATTG 
CTGCGGACTC GGCTGCTGGT ATACTGGTGG CCGGGATGAT TTGCATGACT GGTGCAGAAA 
TTATGGGCGA ATCCATTAAG CAGTTGACGG ACACGAGCAA CGAAGCCCTC GTGAAAAAGA 
TAAAGCGTCT CGCGAAGGAT TACTCCGATA ATGTCTTTGA AGTAACACGA GTGCGGGCGC 
GACAAGTTGG CTCATCTGCA ATTGTCGATG TTGCCATTGC GACTCCGGGA GAGTTGTCGT 
CGTCTGCTTC TCGCGTCATG GCGGAAGGTT TGCGACGCAA GATTATGCAG TCCGTTGATG 
TAGTTGACGC TGAAGTCCAT TCGACTACGC ACGACACTCC ACTTTTGCAT GCCACCAAGA 
CACGAGAAGC CATGGCGAGT AATGGTGTGG TTGTCCAACC CAACATGAAC GACATCGAAG 
AGAAGGTGCG ACAAAACATC AATTCTCAGC ATCCTAAAGT TCGGTCGGTG CAGGGAGTCA 
CGGTTAAGCT TGCCGAGTCG TCGGCCCGCA GGAATAGCGT CGACGTGGTT ATCCGTGTGG 
ATCCCGAAGC AACAGTTGCG GCGGCGCACG CAGTCGCGGA AGATCTGAGA AAATCTCTCG 
AAAATATCGA TCACATCCAT CAAGCTAGTA TTTTTTTGGA CTTGAACGCT GAACTCATAT 
CGGTTTCTAA TGCCTTGAAA CCTTGAATGC GGAACAAATT GTCAAAGCCC AAACCCAATA 
TACTACCTAG CTAACAGGGA TACGGTTGGA CCACAAAGCA GATGGGAGGG AACTGCAATC 
AACTTGCGCA CTCGATAACA CTACACAGCA TTCACAGCTA TACCATCGCA TCCATATCAA 
CTGCATCCGT TGCATTGATG AAAGACTGTA GCGTCACAAT CTTCCCTTTA GTGAATATTT 
CAATTTTGTA CTATAAATTA CTGGTTGCCG CCTTC 

 

Protein sequence

MPSISASVKL SILLACIASL TSPALSFTPL LSSLAASVSK LQAPRSSVCL SKRSSPSRSN 
GALTMHMGHS HSHHIHTHTE ELKNKQLQTK KRRRRAALFL FTALAILGPP LFRQRTLTRT 
DVGTFLLTST ILTMSDTVRR KIQHAIRKIG QLREGIVKHS SPVSPGKFLS YLFRNDNAAD 
RVTLLGSVIN LFLSAGKFAV GVSCHSSALI ADAGHSLSDL FSDFITLWAV QIGRLPPDDD 
HPYGHGKFEA IGSLFLSLTL LATGISVGAA SNRKLIEIIT IQRASGWGTA ASLAGQVPTS 
PALFMAALSI FSKEWLYRIT KQVGDRLNSQ VILANAWHHR SDAYSSVLAL LAIGLAMYFP 
AMIAADSAAG ILVAGMICMT GAEIMGESIK QLTDTSNEAL VKKIKRLAKD YSDNVFEVTR 
VRARQVGSSA IVDVAIATPG ELSSSASRVM AEGLRRKIMQ SVDVVDAEVH STTHDTPLLH 
ATKTREAMAS NGVVVQPNMN DIEEKVRQNI NSQHPKVRSV QGVTVKLAES SARRNSVDVV 
IRVDPEATVA AAHAVAEDLR KSLENIDHIH QASIFLDLNA ELISVSNALK P