Gene PHATRDRAFT_45073 details

Gene Information

• Locus tag: PHATRDRAFT_45073
• ID: 7200161
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: -
• Start bp: 121314
• End bp: 124769
• Gene Length: 3456 bp
• Protein Length: 1085 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002179365
• Protein GI: 219117141

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGGTGCCGCG CTCCGTTTCT TTGTAGTAAA ATACCGGCAA GAGCCCCTCG TGAGCATCTT 
TATTCACAGC ATGCAATCTT CCTTGCGCGC ACGACGTGGT GTGGCTCCCC GGAGAAAAGC 
TGCCGTCGGT CGGTATCAAC TGGTCCTCGC TATTACGTTG TCCGTCGCCT TGACCGGTCT 
CGTGACAACT CAATTTGTGC TGTCGACTTC GTTGTATTCC ACTCAAGAAA AGCAGCAACG 
ACAGCAGCAC AAGAGCCACG CAAAGGGACC TAATCCATCC AATCTAAGGA CCGATTCTTT 
CCCGAGAGAG CAGTTGCACG TAGTTGTGCC GGAAGAACAG AAACAATCAG AGCGGCGATT 
GAACGAAAGC AGTCGGGAAC ACGAATCTCG AGAGAATGAC CATGAAGACG AGCAAAAGAC 
CCGGCCCGAT TCAGAGAAGA AAGATGATCT TCTTACGCAG CAGGACCAAA AGACGACGAA 
ACGAAACGAA CATGGTCCTG CTCAGGAAGG CATCCGCAAG CACAAGACTG ACCACGAGGC 
TCCCGAAAAG GTGGAATCGC CAGTGGATGA GGACCATGAA GTCCAAAAGG CACACAGAGA 
AACAGTGCAA AAATTCGTCG ACGACCGAAG AGTTCGCCTC AAGCACAGAA TCTCTCGACC 
CAAAGTGGCC AGGGCTGCAT CACCGCCTGA GGTGGAACCG CAAATTGAGG TTGCTCCGCC 
ACCCGAAAAG CGACCTTATG ACATTCTGGA TGATCCCTTG CAAAATCCAG ATTTCAACAA 
ACCCTCGAAG CCGTTGAACT TCACGGCCGC TGTACCATAT TTGGGTGTAC TGATTGACGG 
GGGGCGTCAT TTCTTTCCAA TGGACTGGAT GAAACGAGCC GTTGATCGCC TTTCTGATTT 
GCGCTATAAT TTGATTCACT TGCGTCTTAC GGACGACCAA GCCTTCAACG TTCTATTGGA 
TTCTCATCCC GAGCTCGCTT ATCCCGCCGC CGTCAACAAC CCACACCAGC AAGTTTGGAC 
GGCCAGCGAA TTGCGTGACT TGACCGCTTA CGCGAAATCC AAAGGAGTAA GCATCATGCC 
CGAAGTCAAC GTTCCCGGAC ACGCCGGTGC CTGGGCCGGT ATTCCTCACC TAGTCGTGCA 
CTGTCCCGAA TTCATCTGCC AAAGAGGCTA CGGATTGCCA CTAAATGTAA CCCATCACGA 
TCTCAAACCT ATCTTGACGA GTATCTTGAA GGAAGTCGTC GACATTTTTG ATGATCCGCC 
CTTTCTACAT TTGGGTGGGG ATGAAGTCAA CGTACGTTTG TTTTCCGTGT GGAACTTTTC 
TGTGCGTTGT CGGAAGGTAT AAGGCGTTTC TAAACTTTTT TTTCTCTACC AGATGGCCGG 
CCCCTGTTTT AACGAAGTTC GCAGTCCCGT CTTTAATTAC ACGGCTTTCG AAGTTGTTCT 
TAAAGAAATC ATTGCCGATG TAGGCTACCC CGAAAAGCAA GTGGTTCGTT GGGAAATGAC 
CGGGCAGGCT AATTTGGAAC GCGCTGGCGG TGTGGAACAA TTTTGGGAGT CGTATCCGGG 
AGAACGGCAC AAGGCTGCGG GACCTTTTTT CATTTCGAAC CGTTTGTATT TTGATACAAA 
CCAGGATCAA AATGCGTACG AAGTTTGGCA GAATACCCGA CGGTTTTATG TAAATGATTA 
CCAGCCCGAG GCAGTTCCAA CCGCCATTAT TGCCGGCACC TTTGAGTTGT CGACGACTTG 
GTGGTACGAT CGCAATATTT TGGGACGTTT GTTGGCTGTT GCGTTGGGTG CCCGAAACGA 
AACTCTACCA AAGACGATGA AGGACCAAGA CCATGAGAAA ATGGTGCTTG ATCAATACCA 
AGTTTTCTGC GACCAGTTAG GATATAGCCA GGCAATTTGC GAAACCAACG GTGGCCCGAT 
CATCCCTACC CCGGAGTACA AAAAGAAATG GGGTGACGGT TGGGTAGTTT GGAAGGCGCA 
CATCTGTGAA CGCATGACGA CGACTGAGGT AACCAAGGCA ATGCGACCCC GCTCTAGCGA 
CCGGGTCGCC ACGCAGGCGA ACAGCTACTT TTGGAACGTA TTTGGATTTC CTGCGCACAC 
ACACACGCGA GTGGGCCAGC ATCCAACGTT GCCAGACGAT CTCCAGGCCC TCCAGCGACA 
TTTAATTCCT CATTGTGGCG TTATGTTGGA TACGACCAGA TCCCTGGTTC CAGCGGATCG 
GTTGGGAACG ATTTTGACCG ACACCGTTGC AAAATTGGGT TTCAACATAG CCCAGCTGCG 
TTTGGTCAGC AACAAGGGCT TCACGTTTGC TCCGAGTAGT CTACCGCATA CTGTAGGCCA 
TTCGTTACTA GCAACGAAGG AGATCAAGGT ATACACTAGG AGTGACTTGA TGGGTACCGT 
TGCTAAAGCG AGTGCGGTGG GAATCCAAAT GATCCCCGAA ATCAGCATGA CGACAGGAAG 
TGCTGGTTGG TACGAGTCGG GCTATCTAGC GAATTGTCCA AACCGTCTGT GTGAAATTGG 
TGACGCGTCG ATTGACGTGA CGAACCCGTT CTTACCACCC ACCGTGTACT CGTTGATCTA 
CGAGTTGCGT TCCATTTTCA GCAGCAGTCC CTATATTCAT CTCGGTTCGG ACGAGCGTCA 
AGACGCGGCA GCTTGCTACC AAGAAGCCAA TCCCACGTTC CACGCGGACG TGGGAGCGTT 
CGAGCGCAAA ATGGTCAAAG TCTTGGAGGC GAGCGGGATT GCGAACGATT CTGTACTGCG 
GTACGCCAAT TCGCAAGGCG AGGTGTACAG CGACCGGACG GGTGGCGTCA CACACTACGG 
TCCGGACCAT GCGACGGAGA TTCCTGCGGA CGCACCAATA TTTGTGAGTG TGGATTTGTT 
GCGGGACGAT GGGTGGACAT TGTACCAGCG GGTGAAGGAA CTCGTATCGA AAAAGCCGTT 
GGGCATCTTG GCGGAAATCC GTACGTTGAC GGCTCCCCGT TGGGAAGGCC TGGAGATTCC 
GGAACGTTTG CTGGTGTACG CCATGGCCGT ATCGGAATTG CCCACGTACG CGAACGCGGC 
GGCACTGGGC GAGCGGTACG GGGAGCTTTG CCGGGCGTTA TCGGATCGAT TGCCGGGATT 
GGGTCGTCGG CACGATTGCG CGTTGCCGGG TGTCGTCTCG GGGAAGGTGA CGTTTTTGGC 
CGACACGAGT ACCTTTGTGC AGCAGCAGTG TCAAATGGCG ACGTATCCCG TGACGCAACA 
CCACGCCAAG TTGGTAGCAC CCCGGTACAA CGCGACCGAG TGGGAGCAAC TGCGCGGGGC 
GCCCCGCGTG TTTCCGGCGG CGGGTCGGGA TCCCCAGCGG CATCACCCCG TCGTCATCGG 
GCATGGAAAA TCGGGGGACG AGTCCCCGGT CGAGTCCGTA GCTAGCTAGC TAGCTAACTA 
ACTAGGAGTA AACGATGAGT GCATGGATGA GAGAGA 

 

Protein sequence

MQSSLRARRG VAPRRKAAVG RYQLVLAITL SVALTGLVTT QFVLSTSLYS TQEKQQRQQH 
KSHAKGPNPS NLRTDSFPRE QLHVVVPEEQ KQSERRLNES SREHESREND HEDEQKTRPD 
SEKKDDLLTQ QDQKTTKRNE HGPAQEGIRK HKTDHEAPEK VESPVDEDHE VQKAHRETVQ 
KFVDDRRVRL KHRISRPKVA RAASPPEVEP QIEVAPPPEK RPYDILDDPL QNPDFNKPSK 
PLNFTAAVPY LGVLIDGGRH FFPMDWMKRA VDRLSDLRYN LIHLRLTDDQ AFNVLLDSHP 
ELAYPAAVNN PHQQVWTASE LRDLTAYAKS KGVSIMPEVN VPGHAGAWAG IPHLVVHCPE 
FICQRGYGLP LNVTHHDLKP ILTSILKEVV DIFDDPPFLH LGGDEVNMAG PCFNEVRSPV 
FNYTAFEVVL KEIIADVGYP EKQVVRWEMT GQANLERAGG VEQFWESYPG ERHKAAGPFF 
ISNRLYFDTN QDQNAYEVWQ NTRRFYVNDY QPEAVPTAII AGTFELSTTW WYDRNILGRL 
LAVALGARNE TLPKTMKDQD HEKMVLDQYQ VFCDQLGYSQ AICETNGGPI IPTPEYKKKW 
GDGWVVWKAH ICERMTTTEV TKAMRPRSSD RVATQANSYF WNVFGFPAHT HTRVGQHPTL 
PDDLQALQRH LIPHCGVMLD TTRSLVPADR LGTILTDTVA KLGFNIAQLR LVSNKGFTFA 
PSSLPHTVGH SLLATKEIKV YTRSDLMGTV AKASAVGIQM IPEISMTTGS AGWYESGYLA 
NCPNRLCEIG DASIDVTNPF LPPTVYSLIY ELRSIFSSSP YIHLGSDERQ DAAACYQEAN 
PTFHADVGAF ERKMVKVLEA SGIANDSVLR YANSQGEVYS DRTGGVTHYG PDHATEIPAD 
APIFVSVDLL RDDGWTLYQR VKELVSKKPL GILAEIRTLT APRWEGLEIP ERLLVYAMAV 
SELPTYANAA ALGERYGELC RALSDRLPGL GRRHDCALPG VVSGKVTFLA DTSTFVQQQC 
QMATYPVTQH HAKLVAPRYN ATEWEQLRGA PRVFPAAGRD PQRHHPVVIG HGKSGDESPV 
ESVAS