Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44991 |
Symbol | |
ID | 7199664 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | + |
Start bp | 914982 |
End bp | 917208 |
Gene Length | 2227 bp |
Protein Length | 587 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178876 |
Protein GI | 219116162 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AGACCTCCTA AATTGCTTAC AGGAGATGAT TACTGCCACC GTTACACCAT ATATAATACA CTTGAATCGT CCAGCCAAAA AACATAGCGA AGGGCACTCC ACCACGTGAT TGCGTGTAGA AGAAAATAAT CTGAATGCAG TTTCGAGAAG TCGGAGTAAG CAATAATGAC ATCCTGGATT GCCATAGAAA CGGGTATATA TCCTTTGGTG CAAAGAGCAT CTCGCACTAG CTCTGTAGAT GCTCACAAAT ATTTCATTGA GAACACTTCT CACAAAATTT ACGCATAGCC GAAGAAAAAT ATGATATTTC GCATCACCTT CCTGTTGTTC TTCGCCCTCT CCTTGAACAC TGCTAGTGCA GCATCGAAGG CCGAGCAAAA GCAAAAATCG TTCTCGGTTT TGGACTTCCT TCAAGATCCT GTTGCCCAGG AAACCGCCCG TTTTGATGCC TCTCAGCACC AACGCCAGCG TCGAGAGCTA CAAGAGTCTC CAGCTTGTGG CGACCAGATA ACTACCATTA CAGCGGGTGA GATTAAGCAA ATTGCCGCTC TGCTACTGGG AAACGTATTG GCAGGCGATT TGGCGGCTTT CGGTGAAGTG GCTTTAGCGG CAATAGATCA GGTAATTGTA TATGATTTAC AAGCCGTCAA GATCTGCAGT TCCTGCATCG AAACCAACAT ACTGACCGCG GTTGAACCTT GGAGGAGTGC GGAAGGATTC GGCTCTTACA ATACATACTG CAACGAAGGT ATTTTTGGTT TTGATGCCCA ACACAGCAGT GTCATGTTCC TACCGCTTGA CAGAGAGACT GGTTTGCCTG TTAGTGGAAA CCTCCGTGGT GTGATGGCTA TGCACGGACT CTTGTTGGAA AACAGAGATG CTCCCAGCGA GATATTGCCT GCCAATTTGA CAGAGTCTCT GGTAGCAACT GGTCCCGAAG CATTCTTTTT TATGATTATT GCTTTCTTGG AAAGCCTGGT GGCATCGTCT GCGGGAGCAG TTTCTCTGAT GCCAGACTTT CTAGGCTCAG GCGAGTCAGC TCTCACCCAC AATCGAGTAA GTTGGTGAGA CAGTGACCTC TCTCTCTGTT GTAATCATCT TCTGAAAAAC TGACTGCCTC TTTTAGACCA TTTCTGTGCC ACAATTTTAC ATGCAGTCGG CTGCACAGGC ATATTTTGGA GCACAGAGCT ACTTGGACAA GCATACAAAC GGATGTACAA AAATGTACAA TGAATGGAAT GTTGTAGGAT CCTCCGATGG CGGCTTTGGA TCTATTCCTG CTGCTAAAGC TCTTCAAGCA TTGGACAACC GTATCCTGAA TGTATTTGCT GGTGCACCAT ATCTGGATGC CAATGTACAA CTCAGATTTA TTTTTGGTAA GTAGAAGAAT AGGGTCACAA TTAGCAGTGC TTTCTGAAGC TTTTTTAAAG TGCCACTCAC AAAACCAATT CCTTGTTTCT CAATTCTAGA CACATATCTT AGTGGCTTCT TCAGTCCGGA CAAGGATAAC TCCTTCTTGC AGCTGTTTAT TCCACTACTT GGTTTTACGG GCTCAATTGA AAGTCCTGGA TACCCAAACA CTGGGACGGG GCAGAAGTTT GTTGATGCTT CTCAGCTTGC TGCAGTTACC AAGTGGATGG CAAATCCTTC TCCTCTTGGA CCAACTGAAC TTGCAACTAT TGTACCATTC CCGGCACTGG ATATCTTGAA CAAAGACTTA GTCGAAATGT ACCAGACAGC AATTGTGACA AACGTGACCA ATCCTTGTTT GGAAGGCTTG TTTTCCAACA AAACTGATAA ATTGTGTGAT GTCATCAATG AAGGGAGCCT TTTTAGCATT CTCCAAAGCT TTGACATTCA AACTCAGCTT TGCTACAGCC AAGAGGACAC GCTGAATACC CGTGACAACT TCATCCCCGA GCTTTTTGAG AACTCGCTTG TTTCCGAAGT AACTTCACTT TTGCATGGAA TATTGCCTAT TACAGGGGAT CACTTAAAAG CCACCTTCCT TTGCAAAATC AACCCCATCA GCTTCTTTGC TATGAATGGT CCGGCAACAA CCAATCCTCC AGTTTTGACA ACTACCATTG ACGGTGACGA ATTGGCAAAC TACTTAAAAG CATCCGGTCC TCGCACCATC TCCACAATTA CCAGTTCCGG CGGTGTGAAG ATGGGATTTT CCATTTTGTC TACTGTGCTA CTTCTGGCCT ACTTCCCTTT TGTTTGA
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Protein sequence | MIFRITFLLF FALSLNTASA ASKAEQKQKS FSVLDFLQDP VAQETARFDA SQHQRQRREL QESPACGDQI TTITAGEIKQ IAALLLGNVL AGDLAAFGEV ALAAIDQVIV YDLQAVKICS SCIETNILTA VEPWRSAEGF GSYNTYCNEG IFGFDAQHSS VMFLPLDRET GLPVSGNLRG VMAMHGLLLE NRDAPSEILP ANLTESLVAT GPEAFFFMII AFLESLVASS AGAVSLMPDF LGSGESALTH NRTISVPQFY MQSAAQAYFG AQSYLDKHTN GCTKMYNEWN VVGSSDGGFG SIPAAKALQA LDNRILNVFA GAPYLDANVQ LRFIFDTYLS GFFSPDKDNS FLQLFIPLLG FTGSIESPGY PNTGTGQKFV DASQLAAVTK WMANPSPLGP TELATIVPFP ALDILNKDLV EMYQTAIVTN VTNPCLEGLF SNKTDKLCDV INEGSLFSIL QSFDIQTQLC YSQEDTLNTR DNFIPELFEN SLVSEVTSLL HGILPITGDH LKATFLCKIN PISFFAMNGP ATTNPPVLTT TIDGDELANY LKASGPRTIS TITSSGGVKM GFSILSTVLL LAYFPFV
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