| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44902 |
|---|
| Symbol | |
|---|
| ID | 7199817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | - |
|---|
| Start bp | 596687 |
|---|
| End bp | 598262 |
|---|
| Gene Length | 1576 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179028 |
|---|
| Protein GI | 219116466 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GAATGATCCT GTTTTGCGAA TACCATTCTT ACAAATTCCT CTCGTTGGAC AGTAACCATT
GAATTCATCG TATAAGTCAA ATATTTCGGC CAGACCATGG CTACCACATT TGATTCATCT
CAGGCTTTGG CCGGCCTTCC GCCGCCACAC GTCCTCGAAG AGGGCGGGTA CACGCCAACG
ATTGAGGACG CCCTGGTCAA GGAAGAAGCC TTGGAGGTTA TCAAACGAAC ATTTGAAGGC
AACCTCAAGG CTAACGTTAA CCTTGTCCGG GTTTCCAACC CCATGTTTGT CACCAAACGC
TCTGGTTTTA ACGACAATCT CAACGGTACC GAGCGTCCTG CAACATTTGC TCCACGAGAT
TTCCAAGATA TCAAGTTGGA AGTGCCATTC TCACTGGCGA AGTGGAAGCG GTAAGTGTTG
CCCGAGTTCA TCTTGCGACA CCGTCGAATA TCGCAAGTTC CATGGCAGAC TACGTACGTC
TTTTTGCTGA TTTTCTTTTC GTTTTGCTTG CAGCTGGGCC CTGCATTATT ACAACATCCC
CTCGGGCAAA GGCGTTGTTA CTGATTTCCG CGGCCTACGT TGTGACGACG ACGTGGATTT
TACCCACTCA CTTTACGTGG ACCAGTTTGA CTGGGAAAAA CGCATTGACG AAAGCGATCG
CAATGTCACG TACCTCGTAG AAACGGTTAA ACAAATTTAC AAGGCTGTCT ACGACACGGA
ACAGGTGGTT GCGGAAAAGT ACGGTGTCAA GGCGATTCTC CCCAAGGACA TTGTGTTCGC
CAATACCGAC GACATGATTA AGAAGTATCC CGATGTTTCG CCCAAGGAAC GTGAAAATTT
GCTCTGCAAA GAGCACGGTG CCGTCTTTCT CATCGGCATC GGTGGCGCGA AGGAGGACGG
AACGCTGCGT CACGACGGAC GCGCTCCAGA CTACGACGAC TGGACTACCC AACGCGAGGA
TGGTGGATTT GGTCTCAACG GGGACTTGCT CGTCTGGAAT CCCATCCTTG AAATGAGTTT
TGAATTGAGC AGTATGGGTA TCCGTGTTAA TCCGGAAATC ATGGAGAAAC AACTCTATCT
CTGTGGTGTA CCAGAACGCA AGGAATATGT TTGGCACCGT ATGTTATTGG ACGGAACCTT
GCCGCAGTCG ATTGGTGGAG GTGTCGGACA ATCGCGTTTG TGTCAATTTA TGCTTCGGTG
TGCTCACATT GGCGAAGTCC AGCACGGATG GTATGACCCG GACGAAGTCG TGGTTCTGCG
AGAAAAGGGC ATTAAACTGC TCGGACTCGG CGAGTTTGAC GAAGATCCCA TGGCGAATTC
ATTGCATAAG GCCAAGAATG CCATTTAGTA ATGGAGAAAG GTAGCGAAAA GGAAAGATTG
TGGATCGGGA GTGGTCTCTT GTTTGTCGGG AGCGTACATG GGAGAGCCGA TTCTACAACG
TTTTGTATCC GACGACAGAG AAAGATCAAT GATGATGAGT GAATATTACG TGTTATCTGT
CGTGGTCTCG AAAGATTGAA TATGCATGGA GAAAGAAGGG CAATAAATTT ATCAATAAGC
CGTCTACTTT TGGAAT
|
|---|
| Protein sequence | MATTFDSSQA LAGLPPPHVL EEGGYTPTIE DALVKEEALE VIKRTFEGNL KANVNLVRVS
NPMFVTKRSG FNDNLNGTER PATFAPRDFQ DIKLEVPFSL AKWKRWALHY YNIPSGKGVV
TDFRGLRCDD DVDFTHSLYV DQFDWEKRID ESDRNVTYLV ETVKQIYKAV YDTEQVVAEK
YGVKAILPKD IVFANTDDMI KKYPDVSPKE RENLLCKEHG AVFLIGIGGA KEDGTLRHDG
RAPDYDDWTT QREDGGFGLN GDLLVWNPIL EMSFELSSMG IRVNPEIMEK QLYLCGVPER
KEYVWHRMLL DGTLPQSIGG GVGQSRLCQF MLRCAHIGEV QHGWYDPDEV VVLREKGIKL
LGLGEFDEDP MANSLHKAKN AI
|
|---|
| |