Gene PHATRDRAFT_44839 details

Gene Information

• Locus tag: PHATRDRAFT_44839
• ID: 7199556
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011673
• Strand: -
• Start bp: 393597
• End bp: 397124
• Gene Length: 3528 bp
• Protein Length: 928 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002178992
• Protein GI: 219116394

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0126188
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATCCG TCGATGGGGT TGAGCATCTG TCCTGCTCGC TGAGACCACC CACATTGGAT 
GATATTCAGA GTGCGTTTGT TGAGACGTCC GTCTCGGATA CTATTGACAA CAACGATGAA 
ACCCAGGCGA GTACTTTAGA CCAGCCCGCG AACGGAGATT GCACTGCTTG TCCGGGGATA 
AACAGCATCG ACAGTATGGA GCGCGGCGAA AGTGTGGAAG AAATTTTTAG AGCGTCACTA 
AATTTCGACC GATCTAGTTC TTTTTGCTTT TCAGGAAGTC TACCATTATT TGGTGCCTCT 
CTTTATCCGA ATGTTGCGCG GATTGAAGAT GCTGATGGAA TATCGACAAC AGCACAACTT 
GAACAAGGAA AACGAGAGCA GTCGGAAAAT ATCAGAGTGG AATCAACCTA TGCTGAAGCC 
TCGCTGAACA CTCTCACTGA GGAAGCAGTT GTACTCGGCT CGGCTAGAAT GTCCGATGAT 
CCCTGGGACG AAATGACCGT CGAAGACAGA GAAATTCTTG CCATGAAGAG GGCAGCTTAC 
GCCGGAGAAA GGAGCGATCC ACTGGTGGCA CAGAACATCA AGAAGCATGG ACAAGAAGCG 
ACAGTCGTCG CTATATCGGA GTATGACGTG CATCCGAATG AAATTGTCCA AGATGCCGTT 
AGAGCGGAAC TGGTTGGACA GGACTTCACC AGGACAGTCA GCAATGCAAT GGACAACGAA 
AACGTGGAAA GTACAGAAGC GGATGAATTC ACAGTCAGTG CAGTCTTTTC AGCATTGAGA 
ACGGTCGACA ATGAAGCTAC CGAGGCAACT GTGATTGACA GTGCCCCCCT CGCTTCGGAA 
GAAGATATCC CTTCATGGAA GCACACGGAA GAAGCCCAGG TTCTCGTTCT GGATACGTCC 
TTGCCTTTGA TTGACGTTAA ACCAGCAGCT GTTGACTTCT CCGAGTACAG CAACAGTGGA 
ATAGAGCCTA TCGCCGACCA AGAAGCGGAA GTTCTTGGGA TTCAGGAAGA GATACATCCG 
TCCGAGGTTT CAGAGAACGA AACGGAAGCT GAGCTCGTGG GAACGGACCA CAATTTTGCC 
TTCACGCTGG CTAATGAGTC ACATCTTGAC CGTAATACAG CAAGAAGCGA CGAGCCAAAT 
GAATTGCGGC AAGTAGATTT TGTAGTTGAG ACTGTAGATG GCGGTTCTGA CGGTGAAGAG 
CCTATTAGTT TTGGTAATGT TCGCGCAGCT CTTCTGGTTC CAACTATTTT GAACGCTGAA 
ACCGTCGATT CCATTCCAAC GGTAGCACCT TTCACACGCT CACTGTCTAT GGAAGGCACA 
GATACTTCCT TTAGAGATGA TACATCGGCA CAGACGGGGA ATGGGTCCGC GTTCCCGTTG 
CCTCTCCCAC CTCCTAGACA AACTGCTGAA CCCAGTACCA GAAATTCTTC TGTTGGGGAA 
GAAGACAACT CACGTCCTGA TTGGCTTCGA GATTCTCCTG AGCAGCTTCC TTTGGGGAGC 
GAAACGGTAC AAAGAGAAGC TTCGAACGCC AGTGGCAGAA GTGCCGGCAG TACAGGGAAT 
CAGATAGTCC AGAGGACGTC CTCACAACTA CAAGTGGTAA TGTCATATGG CGCATAGCAT 
CAGAATATCC CCTTACTCTA CCACCGAACT CACTGAAGTT TTTTTAATTG TCGAAAAGCT 
TTCCAGCAGC ATAGCTCGCG GTACTAACAA GGCCTTTGAG GCCTTGTTCG GTGATGCAAA 
ACCTCCGTTT GTCAGTCGAA GGCGTCTTGC TGATGGGGAA GCTGCGAGGT ACATCGTTTC 
CCGGACACTT CTTCCCGCTT CCGTTATCTT CAGCCAGCCC ACAAAAATGG TGCGTTCTCC 
AGCGCTCGTG TTGGATGCTC TATCGTAGCT TCGTCTCGGG TTGCTAATAC GTAGTTCGTT 
GTTCTTTTAA AAGTGGATCG CAACTCTGCA GACGAATCAA AAGGCTCTGG ATAGTAACGA 
TGTCATGGAG GCGTCTAAAT CTTTGCGGGC TTTTAGTTTG CCGTCCGAAC GCCAGGCAAA 
ATGTTTGGCC CAAGCTTGGA CGCCTCCGCG GATGGAGCCG TTCGCCAACC ACCCACTGTG 
CAATACCTGC CAGTCCAAGT TTGCTGTCTT CCGTCGAGCC TGTCACTGCC GAAATTGTGG 
TGTTTGCGTC TGCAAAGACT GTACCGTGAC TTGGCCGGCA AAGATGGTAC CGGAGACTTA 
CAACATAAAG AAAACAGCGA CAGTAAACAT ATGCAAGGCC TGTGATTGGC TTTGCAACAG 
CTTTCGTCTT GCTCTTTTGG AGGGTGACCA GGACAAGGCA GTTGCTCTTT ACGCTACTGG 
GAACATCAAC ATCGTGTGCC CTTTTGGAAA CGTACGTAGT CAGCCTACGG AATCCGGCTG 
CATTGCAGTG CCACCACTCA TTTTCATTTC TTCTAGGTCA AAGGAGAGTT GTTCTACCCT 
GTTCACGCAT GCGTTCTCGG TGAGTCACTT TCGATCTTGC GATGGTTAGT CGACGAGAAT 
TGCTGCCCCA TAAAATCCGT TCGAGTCAAT GGAAGGACGA AGGATGGAAT CTGTAACTAT 
ACGGCAATTG TGACATCAAA GGGCCGGTCG TTGCTGGGAA TCGCAATGGA AAACAACTTG 
ATACCAATCG TTCGATATCT GGTTGTAGAG AAGGGCCTCT CTTTGGCAGA GGAGAAGTCC 
CTAACCCGCG AAACGCTTGT CCAAAACCTT CAGCTTGCTC TAAGGGCCAT ACCAAACGCC 
ACAACATCAA CCGAGGCCAT CGAAATGGAT GTGTCGGAAG CATTGTATCA CGACGCCACA 
GTCAATGACA GCGCCGAGGC GGATTTGGGG GACACGACGA GCCCGCTTTC TTCAGAGTAT 
CAAAACGTTG TACCAGTGCC TATTCCTGAC CGCGAACAGG GTAGCGAGAG AGATTTGCCA 
GGTGGGCGTA CTCTAAGTGA AGAAGCTCGC AATTTCGGAG CAATTAGCCG ACCCGGTAGA 
GGTTCTTTTT CGTACGATGG TCGGCAGGAT GAAAATGAAT GTAGGTGTAC TTACTGAAAC 
CCGTCTTAGC CTCAGAAGAT TCTCATTTAT CCAACTTGTT TGTCCACAGG TATCATTTGC 
TTTGACGCCA ATATCGAGTA CGTCCTTCAC TCTCGCCTGA ATATGTTCGT CTCTACCTAG 
CGAGACTTCG TTGCTCACCT TTAATTGTTA CTCTTCGCTC TGAAGTTGCG TGGCTACCCC 
TTGCGGTCAT CAAGTCTGTT GTCTGGACTG CAGCGAGCAC TTGTCCCGTT GTCCAGTTTG 
CGCCATGCCG ACCTCCTTCA TGCGAGTATT TAAAGTATGA AAAGAAGAAA TTAAGACCGA 
AGGTACGCTT GCACTTCGTG TTGTTGGCCA TGCCATACCG AAACGACCCC ATCAGCAAAA 
ACACTTAGTT CAGAAGGATC TGTTGCGTAT AGTTTTGTCA CACGTAAGGC TTTTATGTAG 
ATTTTTATGG TAGTGTATGA GCTTGTCTTT TGGTCTAGTA GTAAGTAG 

 

Protein sequence

MPSVDGVEHL SCSLRPPTLD DIQSAFVETS VSDTIDNNDE TQASTLDQPA NGDCTACPGI 
NSIDSMERGE SVEEIFRASL NFDRSSSFCF SGSLPLFGAS LYPNVARIED ADGISTTAQL 
EQGKREQSEN IRVESTYAEA SLNTLTEEAV VLGSARMSDD PWDEMTVEDR EILAMKRAAY 
AGERSDPLVA QNIKKHGQEA TVVAISEYDV HPNEIVQDAV RAELVGQDFT RTVSNAMDNE 
NVESTEADEF TVSAVFSALR TVDNEATEAT VIDSAPLASE EDIPSWKHTE EAQVLVLDTS 
LPLIDVKPAA VDFSEYSNSG IEPIADQEAE VLGIQEEIHP SEVSENETEA ELVGTDHNFA 
FTLANESHLD RNTARSDEPN ELRQVDFVVE TVDGGSDGEE PISFGNVRAA LLVPTILNAE 
TVDSIPTVAP FTRSLSMEGT DTSFRDDTSA QTGNGSAFPL PLPPPRQTAE PSTRNSSVGE 
EDNSRPDWLR DSPEQLPLGS ETVQREASNA SGRSAGSTGN QIVQRTSSQL QVVIIARGTN 
KAFEALFGDA KPPFVSRRRL ADGEAARYIV SRTLLPASVI FSQPTKMTNQ KALDSNDVME 
ASKSLRAFSL PSERQAKCLA QAWTPPRMEP FANHPLFRLA LLEGDQDKAV ALYATGNINI 
VCPFGNVKGE LFYPVHACVL GESLSILRWL VDENCCPIKS VRVNGRTKDG ICNYTAIVTS 
KGRSLLGIAM ENNLIPIVRY LVVEKGLSLA EEKSLTRETL VQNLQLALRA IPNATTSTEA 
IEMDVSEALY HDATVNDSAE ADLGDTTSPL SSEYQNVVPV PIPDREQGSE RDLPGGRTLS 
EEARNFGAIS RPGRGSFSYD GRQDENEFAW LPLAVIKSVV WTAASTCPVV QFAPCRPPSC 
EYLKYEKKKL RPKIFMVVYE LVFWSSSK