Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44815 |
Symbol | |
ID | 7199912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011673 |
Strand | - |
Start bp | 316656 |
End bp | 317908 |
Gene Length | 1253 bp |
Protein Length | 401 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178975 |
Protein GI | 219116360 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACTCCTCCGA ATTTCACGCC CACAATCCCA AACGCCAACA AGAAACCATG GCGTCGACAC AGCGGAGAAA CGGGGCGCAA GGGCAAAGTA CAACGCGTGT GCGAGAGCCG TTGGATCTTG CTAGATTGGC GTCCTGGATG ATTAAACAGC CGTCGCTTCC AGTCAGCATC CTAAGCTTTG ATATGCTTCT CTCTTCACTT GATATTCAGC AATTCGGCTT TGGCCAGTCT AATCCTACGT ATCTCATCCA AATACGTCCA GGCGATACGG GTAGTTCCAA ACCGTATTCG CTGGTATTAC GCCGAAAGCC TACGAAAATT GTGCACATGT CTGCCCATGC CCTGCATCGT GAGTACAAAG TCCTGCGAGC GCTCGCTCAG CACAACACCT TACACCCAGA TGGAAAGGTT CCAGTTCCCA AGGTGTACGC CTACTGCTAT GATCAATCCA TATTAGGAGC CGAATTTTAT GTAATGGAGT TTGTGCAGGG AAGAATATTC ACCGATCCCT CCTTCCCCGG GCTTTCGACT TTCGATCGCC AAACTGCGTA TCAACAAGTG TTGACGGTTC TCGCCAATCT GCACGCTGTC GACTTAGACG AGGTGGGATT GGCCACTTAC GGTAAACGGG GACATTACGT TTCTCGCCAG TTGGCACGAC TACTCGCGAT CAGTCATCAG CAATCCATTT TGGCGGGTGC TCGCGTCCCT GAAATTGAAG CTTGTGCAAA AGCGTTGAGT GTACACGCTC CCGTTTGTCC CGATGCCATT TCGCTCCTGC ATGGTGACTT TAAAGTGGAC AATTTAGTAT TTCACTCTTC AGAACCGCGC ATTGTTGCCG TCCTGGACTG GGAGTTGTCA ACGATAGGGG ATCCTCTATG CGATGTTGCC AATCTTTCTA TGATGTACTA CATTCCACAT CCTTCCACAA TTGGTATTGC TGGAATCCAA GGGGTTGACT TCGAAGTGTT GGGACTACCA ACCAGGCGCG ACTTGGTACA TGGCTACTGC TCACGAAATA CTCTGATCGA TGTTGACTCG GCTTGGGAAT GGAGCGGTTT CTATCTGGCG TTTTTGTTTT TTAAAAACTG CGTGATAGTA CAAGGTGTTG CGCAGCGCGC AAAAGCAGGC GTCGCCAGCA GTGCGATGGC CCATCAAGTT GCCGAGCTCT TACCGACTGT ACTGCATTTG TGTCGATACA TTATACGTAC ACTCCCCCCT CCCTCTCCGA CCAATTTGAA GAGTCGCCTT TGA
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Protein sequence | MASTQRRNGA QGQSTTRVRE PLDLARLASW MIKQPSLPVS ILSFDMLLSS LDIQQFGFGQ SNPTYLIQIR PGDTGSSKPY SLVLRRKPTK IVHMSAHALH REYKVLRALA QHNTLHPDGK VPVPKVYAYC YDQSILGAEF YVMEFVQGRI FTDPSFPGLS TFDRQTAYQQ VLTVLANLHA VDLDEVGLAT YGKRGHYVSR QLARLLAISH QQSILAGARV PEIEACAKAL SVHAPVCPDA ISLLHGDFKV DNLVFHSSEP RIVAVLDWEL STIGDPLCDV ANLSMMYYIP HPSTIGIAGI QGVDFEVLGL PTRRDLVHGY CSRNTLIDVD SAWEWSGFYL AFLFFKNCVI VQGVAQRAKA GVASSAMAHQ VAELLPTVLH LCRYIIRTLP PPSPTNLKSR L
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