| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44774 |
|---|
| Symbol | |
|---|
| ID | 7199739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011673 |
|---|
| Strand | - |
|---|
| Start bp | 206949 |
|---|
| End bp | 208643 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002178951 |
|---|
| Protein GI | 219116312 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0253106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGTTGTCAGA AAATAGCCTA CAGAAGGCCG ATGGACCGGT ATTTGGCCTT TCCACATCAG
TCAACAGGCC CAGGTAGGCT TTTCACCTTC GTTTCGCTCG GCATTTTTCC AAACACCCTT
CCAAGCGCAG ATAGTGTTGG ACTCTCTCTA GCCGACACAG ACCAACATGA AGGGGGAGAC
GATCTACGAC GTTTGTATTG TTGGAGCAGG GCCTGCCGGA CTGGCTTGTT TGTCGGCTGT
CCAGGAGCCC TTTACTCTGG ATACTTTGAG CGACGATCAA GTGCACCGAG CGTTGCGGGC
CTTACCCGCA AAGAAAACCG CGCATCGCCG AGTTTGCGTG GTTGATCCAA ATCCAACATT
TATGTGTGGT TGGAAACGCC AATTCGACGT GCTTCAGATT AAGTTTCTCC GTTCTCCGGC
ACTGGCGCAT CCCGATTTTT TTGACCAGAA TGCGCTGTTG GCTTACGCAC GACAGCACGG
TCGCGAAGAC GAGCTTTTGG AATCGGGTTG TGCTCGTCTG CGTTCATTAT TGCCTTTGGG
GCAATCGCAG ATCGGTTTGT GGAAACTGCC GTCGACGCAA CTGTTCCAAG ACTTTTGTCG
AGACCTGCTG CCCACTCTGC GTCACGAGTA CCGGCAAGGA ACGATTGTTG ACCTACAGTC
TACGGATGGC AATATGTTCT GCTTGACCAC CGCTGTGGGG CAGCAGCTTC ACGCCCGGAC
CGTGATTCTG GCCATGGGCG CGATTGGCAA GCCCGTCATA CCTGCGGCTC TTCAGAAGGA
CATTCCGCAG GTGCATTCGT GGATGGAGAT TGACCGTCTC GAAGCGCAAT GGGCGTCCAA
ATTCTCGGTG GACAACGAAA CCGTCATGGT GGTGGGAGGA GGTTTAACCG CGGTGCAAGC
GGCATTGCGA CTGGCACGCA TTCCGACGGG CGGTAGCCAA CGTCGTCGTC GTGTGATACT
CAGCAGTCGC CGACCACTGG TGGAGCGGCA CTTTGATCTG GGAGTCGAAT GGTTCGATCG
ACGGACGGCG ACCAAGTGTG TCGCTGACTT TTATCACCAG CCCGTATCGG AACGGTTGGC
ACAATTGCGA GAGAGTCGCG GAGGAGGAAG CGTGCCACCC ATTTACATGG CCGAATTGCG
TAAGTGGGAA CGACAGGGTC GGATCGAATG CGTGGTGGGC TCTATCGATT CCGCCGCAGC
ACAAAGTCAG GCGTCCGGAG ACGCACGCGT CCAAGTCACG ATCGAGTCCC AGAAGTACCG
GGTGGACGCC ATTGTGCTTG CATGCGGCAA TCAACCCGAT TGTCTCGCAC ATTCGCTGCT
GCTGCGTCGT ATACAGGAAC AGTGGCCGGT GCCCATGCAG GGTGGCTTCC CGTGCGTAAC
GGAAGATTTG CGATGGAGCG CCGCTTGTTC CGGTTTGTAC GTAGTGGGTG GCTTGGCGAG
TCTGAACGTG GGACCCGACG CGTCCAATTT GATGGGCATT CGACGAGCGG CGTCCATTGT
CTCGTACCAC GCACTGGCGT GTCGTAGTTG GTTGCGTGAA GCTCAGTCAC CGGTCCTGGC
CAACCGATTC CACGCACTGT GGTCGGACAG TGAGAGTGAG TGCGAGTTCG AATGCACGTG
TGAGAGTGGT GATACCGACA GTGAAACCGA CGATTCCTGC ATGTTGTTGG TTCCTGCATA
GTATGTGGAA TCACA
|
|---|
| Protein sequence | MKGETIYDVC IVGAGPAGLA CLSAVQEPFT LDTLSDDQVH RALRALPAKK TAHRRVCVVD
PNPTFMCGWK RQFDVLQIKF LRSPALAHPD FFDQNALLAY ARQHGREDEL LESGCARLRS
LLPLGQSQIG LWKLPSTQLF QDFCRDLLPT LRHEYRQGTI VDLQSTDGNM FCLTTAVGQQ
LHARTVILAM GAIGKPVIPA ALQKDIPQVH SWMEIDRLEA QWASKFSVDN ETVMVVGGGL
TAVQAALRLA RIPTGGSQRR RRVILSSRRP LVERHFDLGV EWFDRRTATK CVADFYHQPV
SERLAQLRES RGGGSVPPIY MAELRKWERQ GRIECVVGSI DSAAAQSQAS GDARVQVTIE
SQKYRVDAIV LACGNQPDCL AHSLLLRRIQ EQWPVPMQGG FPCVTEDLRW SAACSGLYVV
GGLASLNVGP DASNLMGIRR AASIVSYHAL ACRSWLREAQ SPVLANRFHA LWSDSESECE
FECTCESGDT DSETDDSCML LVPA
|
|---|
| |