Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44711 |
Symbol | |
ID | 7197907 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 1357536 |
End bp | 1358776 |
Gene Length | 1241 bp |
Protein Length | 309 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178411 |
Protein GI | 219115231 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.709544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCTATTTTTC CGCCCTTGGA AAGGCTGTTT GAGAAACTTT GTCGGGCTTT CGTGTCGTCG AAGAACAGTC CTACCCGTGG GGTGTTGTTT GTAGCAACGT CGAAGCGAGC TAGTTTGTTG CGGTAGTCGA GAAGTGGCGA GAATGAAGTT AGGCAAGGGC CTGGGCTAAT CCGGCTGTCT TAGCCGGATG TTTTGGTGAG AAAATGGTTG ATTGGGGTCT TCAACTTCCC TTTCAGATGG GCCTTGAGGC CTACTTGACC TCGCAAGTCA TTGAGGCACT GGACAGAGGC GACCCTGCCG AAGTTGCCGA TGTCCTTAGC GTCGCTTTTA TCAACAGGAA CGTCTCGCGC GTTATCATAG GTCAATTACG TCGTCCACGC CCTCCGACAG CTCGCCAAGC ACTGGTACAA CATGCTGTCT CAAGAGTGGG GTAATTTTGC CCACCAGCGC ATGGAACAGT TGGATCCCTT CGAAACACTA CGCTTTCACA TGCCCCGGGT CCTCCTTTTG CTGTCGAGTT TACGGGGACG CAACGCGTGG GATGCTCAGG TATTAGGCCC AATCATGCGT AGATTGCAGG CTTTGAAGCC CGCTGTGGAT AAATGTCGAG TCAGGCAACG ATAAAATGAT TTCTTTGAAA GTAGCTCATC TCATGCCTCG GGCCTAAATT CCGGTGGCGG AAAACTTACT ATACATACAA CCAATCCGCC GCTCGGTACA CGCCGTTCCT TTGCGAGGAG AAGACTTCGG AGTTGATCAA CTTTGGTAAG ACCAAGGTTG TGCGAGTACC GCCGCAATCC GTTCTTGTCG TCGGAGGAGG CCCAACTGGA CTTATCACGA CAATTCCCTG TACGGAAGCG TGTTTAGCTA CTGGGGGCAC CATGAAACTC CAGGAGGCTC GCGATGCTTT TGCGAAAGGA GTATCAACCT TTGAAAGAGC CCAGATTGTT CGACTTGATG CTCGCTGGAT AGCCATGCTA AGGTACCATC TTGGAAACAT TTTTGAGGAC GTCTACATTC CTGCTTCCGG GGAAACCGAT GCTCAGTGGG GAAATACACT GTAAGTGAGC ATTTTACTGT CTCCATTGCT GTTCTAATCA GCCCTTGATA TTAGGTTTCA GTGCCTGGGA AAAAGACGCA CGGGAGACTT TCTTCAGCAG ACTGTACCAA TGGCGTCTAT TCAAGATGCT AACTTCACTC TGGATCTCGG ACATACTGAC GTTGTCGAAG CCATCGGGTA A
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Protein sequence | MVDWGLQLPF QMGLEAYLTS QVIEALDRGD PAEVADVLSV AFINRNVNYV VHALRQLAKH WYNMLSQEWG NFAHQRMEQL DPFETLRFHM PRVLLLLSSL RGRNAWDAQV LGPIMRRLQA LKPAVDKCRL ISCLGPKFRW RKTYYTYNQS AARYTPFLCE EKTSELINFG KTKVVRVPPQ SVLVVGGGPT GLITTIPCTE ACLATGGTMK LQEARDAFAK GVSTFERAQI VRLDARWIAM LRYHLGNIFE DVYIPASGET DAQWGNTLFQ CLGKRRTGDF LQQTVPMASI QDANFTLDLG HTDVVEAIG
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