| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44618 |
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| Symbol | |
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| ID | 7197622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 1065041 |
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| End bp | 1067184 |
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| Gene Length | 2144 bp |
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| Protein Length | 663 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | XP_002178632 |
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| Protein GI | 219115673 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCTTTGCAA TCACGCATTT CAGCTTGCCA CAATCCATCG AAAAAACACG TCCGGTAGCA
AAAGCTAGTT TCTAATATAC GAATTCAAAT CTTTCAGAGC CTTTCTTAAT TGAACATTGT
CCTTGCCATA TTCCTAAAAC AGAACGTTCG TCATGAAGTT CATATTGACC GCTTCCATAG
TAGTCACTGT TTGGCTAGCT TCCTCTCCGA AAACTATATC AGCGTTTACG CCCATCAATC
TCCGAAACGG TGCTCTCAAA GCAAGCAAAG TCCGTTCCTC ACAAAGCCCA ACTATTCGTC
GCAATGGCCT CGCTGCAATG CCCGAAGACG CCAACAATGA GCTCGACACA CACATTGTCT
TAAAGCAACG ACAACCTCGT CCTGCATACA TCCCTGGGAA AATTGATGAT CCTGATTATG
TTAGGATTTT CGACACCACT CTGCGGGACG GGGAACAAAG TCCGGGAGCA ACCTTGACTT
CGGCGGAGAA GCTTGAGATT GCTCAAATGC TCGCAAAACT TGGCGTTGAC GTTATCGAAG
CTGGTTTTCC CATTGCCTCG CCAGACGACT TCAACGCCGT CAAACAAATT GCGGACATTG
TCGGTAACGA TGTTTTCGAG GATGGGTACG TTCCTGTGAT CTGTGGATTG TCCCGTGCTA
ACCAGAAGGA TATTCAGACT GCCTGGGACG CTGTCAAAGG CGCAAAATTG CCCCGAGTCC
ATACGTTCAT TGCAACCTCC CAAATTCACA TGGAAACCAA GCTCAACAAG ACGCCCGATC
AAGTTGTGGA AATTGCCGTG GAAGCTGTCA AATTTGCGAA AAGTTTGGGC TGCAATGACA
TTGAATTTTC TCCCGAAGAT GCTGGTCGAT CTGACCCAGT CTTTCTGTAC CGCATCTTGT
CCGAAGTTAT CGTTGCGGGC GCGACAACGC TCAACATTCC CGATACTACA GGCTGGAACA
TGCCGTGGGA ATTTGGCGAT TTAATCAAGC AATTGCGCGA AAACGTCAAG GGCGCCGAAA
ATGTTGTTTT TAGTACGCAC TGTCAGAACG ATTTGGGTCT TGCCACAGCG AACTCTTTAT
CAGGTGCTTT GAACGGTGCT CGCCAGCTAG AATGTACGAT CAATGGAATC GGAGAACGTG
CTGGAAACGC ATCTTTGGAA GAAATTGTGA TGTCTTTGGC CCTCAAGGGT GCGACCAAAT
TCTCCGGGGG ACCGGGTACG GGGAAACTTT TCACAGCCGT AAACCCAGTC TATATCACAC
CTACGTCCAA GATGGTTTCC GAATATACAG GAATGGCATG TCAACCTCAC AAGGCTATCG
TCGGGGCAAA CGCATTTCAA CATGAGTCAG GAATTCATCA AGATGGTATG ATCAAAAACA
AGAGTACCTA CGAAATCATG ACACCGGAGA GTATTGGATT GATGCGTGGT GAATCGCAGT
CAGGTGCTGG TATCGTGCTT GGCAAGCACT CGGGTCGCAA CGCTGTCGGA ACACGCCTTC
GTGAATTGGG CTACGACTTG GATACGGAAA AGCTTAATGC GGTCTTTGTG CGTTTCAAGC
AAGTTGCCGA ACGCAAAAAG GGCGGCTTGG AAGACGAAGA TCTGGAAGCG TTGGTATCGG
ACCAGGCGGG TCTTTCCAAC CTTCTTTGGG AAGTGACAGG CTTACAAGTA GCAACAGGCT
TGTCAGGAAT TCCAACGGCC ACCGTCAAAA TGCTTGGCCC CGATGGTTTG GAAAGATATG
TTGCTTGTAC TGGTACTGGA CCAGTGGATG CCGTTTACAA GGCTATCGAC CAAATTATGG
GTGTTTCGGT TCGCTTAGAA GCCTATCAGC TGAACTCCGT TACAGAAGGC ATTGAAGCTA
TGGCCACAAC ACGAGTGGTC ATTGCCCCAT TGGAAGGAGG TCCGAATGAT TCCATTTCAA
TTCATTCGCA AACAGGTGTC AGTCGAAATC GCAAGTTCTC TGGATCGGGA TCGGACACAG
ACATTATAAC TTCCTCAGCT CGTGCGTACG TTTCGGCCTT GAATAAGCTC CTGAAATGGA
ATGCCCGCAG TCGAGAACAG GCACGTGAAG AAAAGACGAA TGGGAGCGGA GTCGGGGATG
CCGAACTAGC AGGAAACATG GAAGTCGCCG AAGTATCTCA ATAA
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| Protein sequence | MKFILTASIV VTVWLASSPK TISAFTPINL RNGALKASKV RSSQSPTIRR NGLAAMPEDA
NNELDTHIVL KQRQPRPAYI PGKIDDPDYV RIFDTTLRDG EQSPGATLTS AEKLEIAQML
AKLGVDVIEA GFPIASPDDF NAVKQIADIV GNDVFEDGYV PVICGLSRAN QKDIQTAWDA
VKGAKLPRVH TFIATSQIHM ETKLNKTPDQ VVEIAVEAVK FAKSLGCNDI EFSPEDAGRS
DPVFLYRILS EVIVAGATTL NIPDTTGWNM PWEFGDLIKQ LRENVKGAEN VVFSTHCQND
LGLATANSLS GALNGARQLE CTINGIGERA GNASLEEIVM SLALKGATKF SGGPGTGKLF
TAVNPVYITP TSKMVSEYTG MACQPHKAIV GANAFQHESG IHQDGMIKNK STYEIMTPES
IGLMRGESQS GAGIVLGKHS GRNAVGTRLR ELGYDLDTEK LNAVFVRFKQ VAERKKGGLE
DEDLEALVSD QAGLSNLLWE VTGLQVATGL SGIPTATVKM LGPDGLERYV ACTGTGPVDA
VYKAIDQIMG VSVRLEAYQL NSVTEGIEAM ATTRVVIAPL EGGPNDSISI HSQTGVSRNR
KFSGSGSDTD IITSSARAYV SALNKLLKWN ARSREQAREE KTNGSGVGDA ELAGNMEVAE
VSQ
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