| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44574 |
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| Symbol | |
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| ID | 7198085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 944634 |
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| End bp | 947670 |
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| Gene Length | 3037 bp |
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| Protein Length | 556 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178609 |
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| Protein GI | 219115627 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GAACCACAAG GATTCACAGT CAATCACTGT TCGAAATGGC TCCATCTGTC TCCGTCTACC
ATGGGGCTGC TCCTATTTAT GTAATATGGC GAGTTATGAT GGCCAATCGC ATGCCGATTA
TGGACTGCGA CGAAGTCTAT AATTATTGGG AACCCCTGCA CTTTATTCTC TACGGATCGG
GTCAACAAAC GTGGGAGTAC GCGCACGAAT ACGCGCTGCG AACGTACGCC TACGTGGTTC
CGTTGCAATG GCTTGCCCCG GTTCTCAGTC GATTTGTGTC GCCCTACGCA TGGTTGTTAT
CGGATTACGT TGTTGATACC ACCCTTGATA CCAGCAAACT ATCCTTGTTT CTTTCGTTTC
GGGCTTTTCT TGCAGGTACC ATGGCGCTTT GCGAACTGGC TTGGCTCTAC GCATTGCACT
CCCGACTCTC CAAAGACAGT TCGCTTGTTG TAGGCTGGAC GGGAGTGCTG TTGTTGACTG
CTGCAGGCAT GAACCACGCC GCCGGAGCAT ACTTACCAAG CTCGACCTTT ATGATGGCGT
GGCTCGCTGC GAGTGCGGTT TTTCTGTTGG AACGTCATTT TTTATTCGCA GCAATTGCGA
TTATATGCAC ACTTTCAACT GGATGGCCCT TTGGAGTCGT TGTGCTCGTG CCCTTGGGCA
TTCGTGTTCT AAGAAAGGAA TACAGAGCAC GTGGCGTGTG GAGGTTGTTG CTCTGGAGCG
TTGGCGTTAC GGCTGCGGTC GAAGCTGCCG TCTTGATGAT CGACCACAAA TTTTACGGGG
TGTGGCTATC TCCGACGTGG AACATATTCA AGTACAACGC CGCGGGAGGC GGCGACGAAC
TCTACGGAAT TGAACCAACA TCCTACTACA TCAAAAATCT GTTTCTGAAT CTGAACCTCC
TAGCCCCGAT GGGTATCATC GGCCTTCCCG TTCTCGTCTT TTCGCGAAAT CAACCTGCCA
AAGCAGACCT AGTGACAATG ATAGTCACGC TCTACACATG GCTTGCTATT ACTGTCCCTC
GTCCGCACAA AGAAGAACGG TTCTTGTTCC CAATTTATCC GGTGCTGGTA CTATCTTCTG
TTTTGACGGT TGACCACACT CTCAATTTCA TTGGCCGAAT TGTTGCGGGA TTTTCTCGTC
ACAAGACTCT CGTGCGTAAC CAGCGGATAG CTTTGCACTG CCTCGTATGG CTTCCCGTCG
TCGCGATGAG TTTGTGTCGC GTGGCTGCCT TACACAAGTA TTATACAGCT CCGTTGCAAG
TGTATGCAGC ACTAGTTTCC AGAATGGACC CACTCTCCAA CCAACTGGTC TGTAGCTGTG
GTGAATGGTA TCGATTTCCG AGCTCATTCT ATTTACCAAA GAACCATGAC CTCGGCTTTC
TCCCTTCGTC CTTCGGTGGG CAGCTACCAC AAGCATTTTC TGTACACGGA TCGCTACCTA
AAAGTCTGAA TCTTTTGCAG CCTTTCAACG ATCAAAACCA GCAAGAAATG TCGCGGTACG
CTACCTTGGA TCAGTGCAAT TATATTGTGG ATCTAGAAGG AAGCGATTGT GCTCCTTCCG
GCGCCGAGGT CGTTGCTCGT GCTCCGTTTT TGGATGGTGG ACGATCCTCA ATGATTCATC
GTATGTGGTA CCTTCCGATA TTGCACGATG CCGCCATCAA ATCCGGGAGC GTGCAATACG
AACACTATGT TTTGTACAAG ACTTGAGGTA TGTTGGTTTC CGACGAGACT AGTCTACAGC
ACTTGTTTCG AAAAGTAGGA AAGCTCGGTT GCTACGGTTT TTGGAAGAAT TTCAAGTATT
GAAATTCTCC ATCCGAGTGG TTCTCTTTCG AAAAAAGCCG TGGTGTGTTT TTTGGATGAG
AAATCTGTCG GTAGAGACGA TGATGAAAAC ACTTTATCTA TTGGAGCTGT CTAAATGAAT
GCGTGTTGAA AAGCAAAGGG GTTTATCTGA GTCTCACTTG TTTTAGTACA ATATCTCCTG
TAAACGAGCA TTTTCCCTTG CTGACAAATC GCCTTTCTTC GCAGGCTGTT ATTGAACGCG
ACGACTTATA TTACGGAACG AGTTTCTTTT CCAAGTAGGT CAAAGGTACG TGAGGAAAGC
AGATGCCACC CCTTCGCATG TCCGGAAAGT GATGCAAAAA TGATGAAGTC CAATTGCTGA
CCGAACACAT TTTGTGGAAA TAAATTCACA GCTATTTCAA ATTGCCTGAT TCCTTTTATG
CTATTAATAC GCACGGCACG CTTTTTCCTT TCTCTCACTC GTGCTTCTCT GTTTAGATTT
GCGTAAAGGG CCAAACGATC CGAACGCATC GCACACTTTC CACACTTGAG CTTGGAGCCT
AATGTGGAAT GGTATCCAAT GCTTTTGTTA AACCTTCGGC AGCGTCTGAA AACACGTAGG
CATTACAAGA TTTTTAAAGC GCTTCGCACA CGAGAATTAT TCCTATCAGG AAAGGGTTTA
TTCAATTGGC ACGACTTCCC TAGCGAGATC TTTGAGGGAA GTCATATCTG TCTCGTACAA
ATGTACTTTC GGTTCTGTTT TGTTGTCGAG TACATCTTCT TGGTACAAAC CGACCACACG
AACGCCCTTG GTCATTCCAG GAACCAGAGT AATCATTAAC TTGTGTAGTG ATGGTACGGG
ACGTTTTTCC TCTTTTGCCT TTTCGATCTC AAACTGTTCG TCGTAATCAG CATACCCCAG
GACTAAACCG TCTTGGTCCA CTGCGTAGGC TACTTTCAAG CTCATTCCAT CCTTCGTTAC
CGGTATTATG CTCGACGTGT TCACAATGAA GGGCTTCTTC TCTAAGATAA CAAATCGTTT
CCAGTAGGGA ACGAACTTGT CCAACGACCT CCACCCAGCG ACGTCTTCAA TAGCCTTTTT
AAATGAACCT TCGTCCTTCA AAAAATCAAA CCACTCCTTC CAATCATTTT TCGAATTCAA
GGCTTTTGTT TCACTGAAAC GGAAATCAAT TTGAATATTG CGTACGTTGA CTTGATTGAC
ATCAAGAGCG ATAAGGACAT AAAGCTCGGC ATTCTCC
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| Protein sequence | MAPSVSVYHG AAPIYVIWRV MMANRMPIMD CDEVYNYWEP LHFILYGSGQ QTWEYAHEYA
LRTYAYVVPL QWLAPVLSRF VSPYAWLLSD YVVDTTLDTS KLSLFLSFRA FLAGTMALCE
LAWLYALHSR LSKDSSLVVG WTGVLLLTAA GMNHAAGAYL PSSTFMMAWL AASAVFLLER
HFLFAAIAII CTLSTGWPFG VVVLVPLGIR VLRKEYRARG VWRLLLWSVG VTAAVEAAVL
MIDHKFYGVW LSPTWNIFKY NAAGGGDELY GIEPTSYYIK NLFLNLNLLA PMGIIGLPVL
VFSRNQPAKA DLVTMIVTLY TWLAITVPRP HKEERFLFPI YPVLVLSSVL TVDHTLNFIG
RIVAGFSRHK TLVRNQRIAL HCLVWLPVVA MSLCRVAALH KYYTAPLQVY AALVSRMDPL
SNQLVCSCGE WYRFPSSFYL PKNHDLGFLP SSFGGQLPQA FSVHGSLPKS LNLLQPFNDQ
NQQEMSRYAT LDQCNYIVDL EGSDCAPSGA EVVARAPFLD GGRSSMIHRM WYLPILHDAA
IKSGSVQYEH YVLYKT
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