Gene PHATRDRAFT_44473 details

Gene Information

• Locus tag: PHATRDRAFT_44473
• ID: 7197756
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011672
• Strand: -
• Start bp: 676155
• End bp: 678173
• Gene Length: 2019 bp
• Protein Length: 652 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002178554
• Protein GI: 219115517

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGCCTTTGTG TTCCCGGACA GTGAGTGAGC CACCCCCTTC TCCCACCATC ACGCTGAATC 
ATGACTGGTC CGACACCGCA GGATGAAATT GATCGACAGC ACGCACAAGC AAACAAGTTG 
GTGGAGCAGT CGCAACCTAC ACCAGCTGTT CGTGTGTCGG ACGGCAAGGA AATCGCTCTG 
CGCTACAAGA CTCGTCCCGT AGACGACCTT CTAGCACGGG GGAGCGCCAC CTTGATCGAA 
TCTGCAACGA ATCCGCAAGA CGACGACGAT CGGGAAGACT GGGTGGTCGT CGATGAACAC 
TTTCCCACTT GGAACACGCG TGGTTTTGTC GATGTGACGG CCTTGCAGGA CTTGGTTCGC 
GAAGGATACA ATCAGACCGT CCCGGTGATA CCGATGTCGG TAACAAAAAC CACGACGACG 
ACAGCAACAG AAAGCACGAC GACAGGGTCG CCCAATCCAT CCACTTCCGG TTCCCAAAAG 
CGCAAAACGT TTCAAGCCTC CGACGTTAAA TCCATCACCA ATTTATGGAG CGAACCCAAC 
GCCGCCGTCC ACAACGTCGC CATCTGCCGT CCCTCGCACG ATGCCTGGGG TATCAACAAA 
ATCGTTCTCG TCTTTTGCGA CGACTTTTTG CGCGATATTT ACGAACTGCC TTGGTGGCAC 
GGGCGCGATG ACATGCGGTT GGCCGTACAA CCGATTCTGG ACGTTTTGCG CATTCCACCG 
CAGCGGATCG TCCGCATGCT GCTGGCGTCC TTGCCACCTG GGGTGACCAT TCCCGTCCAC 
CACGATACGG GAGAATGGGT CCGACACACA CATCGCGTCC ACGTACCGGT TCTGGTGCAG 
AACCCTGATC GGGTCGTCTT TCAATGCGGC GTAGCCCTGG ATTCCCTCCA GCGCATCCCC 
TGTACACCTG GTCACGTGTT TGAAATCAAC AACCAGGCGA AGCACGCCGT ATCCAACTGC 
GACACTGATC ACCGGGTGCA TTTGATTCTC GATTACGTTG ACGCCGACTT TCCCTTGCTC 
CCCCGGATTC TTCTCCGACC CGGTGAAAAA CTTCTCCAAA CACGGCGGTC GATTGATCGA 
TTGGAGAATC GGGGGTCGCG TCCCACACCT TCCTTTTTAA TCCTCGGAGC GCAAAAAGCT 
GGGACCACAT CGCTCTACGA ATACATCGTC CAGCATCCTT TGGTGGTTCC TGCACGCCGT 
CGGGAAACTC ACTGTTTGGA TTGGCGCTGG AACGATAAAC TCAAGTCCGT CAAAGCGCAA 
CGCGCTTGGT GTCACAAGTT TTACCTCACC CAGGAACTGT CTCTCCATCC GTCGTGTTTA 
ACAGGCGATT CCACACCATC CTACTTGCTC GATAGCCGTC GGGTAATCCC ACGCATTCGC 
AACATTTTCG ACTGGCCCCT CAAGTTTTTC GTAATGTTAC GGAATCCCAT CCGGCGGGCG 
GAGTCACATT TTGCCATGGT TACCAGTTCA GAGGGTACAC CAGCGCAGCT AAAGGCTCGA 
GGCTCTGAAT GGCGAAACAA AACGTTCCGA GAGGTAGTGC ACGACGATAT GCGCACGATG 
CAAACGCATG GACTGATCCC GTACTGGAAT GTTGACGACG GTGTTTTGGA TATAGCATGT 
TTTGATACGT TTGTGGGTAG CCCAGAAGAA GACGCGGCGT ACGATAGGTA TCTAGCACAG 
GTCCCGTTAC ACACGGGATC CCACAGTCTG ATCAGCCGCG GATTGTACGA ACTACAACTT 
CGACCCTGGT TCGTGGCGTT TGACCCCGCA GCTTTTCTGG TTATGAAGCT CGAGCATTTT 
CGAGAACGCG GCGTAACAAC TGCTATGGAA GCCGTTTGGA AGCATTTGGA TTTGCCATGC 
GTTTCGATAC AGAATGAAGA AGCCAAAAAC GTTCGTTCTT ACGATCCGAT CGCCGATGAC 
TCGATGCAAG TCTACTTGGA ACGCTTCTAC GCACCGCACA ATGAGCGCCT GGTGAGTCTT 
TTGGGCGACG ATGCGTGGAA TCAAGCCTGG TGTCCATAG 

 

Protein sequence

MTGPTPQDEI DRQHAQANKL VEQSQPTPAV RVSDGKEIAL RYKTRPVDDL LARGSATLIE 
SATNPQDDDD REDWVVVDEH FPTWNTRGFV DVTALQDLVR EGYNQTVPVI PMSVTKTTTT 
TATESTTTGS PNPSTSGSQK RKTFQASDVK SITNLWSEPN AAVHNVAICR PSHDAWGINK 
IVLVFCDDFL RDIYELPWWH GRDDMRLAVQ PILDVLRIPP QRIVRMLLAS LPPGVTIPVH 
HDTGEWVRHT HRVHVPVLVQ NPDRVVFQCG VALDSLQRIP CTPGHVFEIN NQAKHAVSNC 
DTDHRVHLIL DYVDADFPLL PRILLRPGEK LLQTRRSIDR LENRGSRPTP SFLILGAQKA 
GTTSLYEYIV QHPLVVPARR RETHCLDWRW NDKLKSVKAQ RAWCHKFYLT QELSLHPSCL 
TGDSTPSYLL DSRRVIPRIR NIFDWPLKFF VMLRNPIRRA ESHFAMVTSS EGTPAQLKAR 
GSEWRNKTFR EVVHDDMRTM QTHGLIPYWN VDDGVLDIAC FDTFVGSPEE DAAYDRYLAQ 
VPLHTGSHSL ISRGLYELQL RPWFVAFDPA AFLVMKLEHF RERGVTTAME AVWKHLDLPC 
VSIQNEEAKN VRSYDPIADD SMQVYLERFY APHNERLVSL LGDDAWNQAW CP