Gene PHATRDRAFT_44439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_44439 
Symbol 
ID7197736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011672 
Strand
Start bp552824 
End bp553701 
Gene Length878 bp 
Protein Length210 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002178251 
Protein GI219114911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAACGGAGCC ATGCGGCGCT ATTAGTCGAA GCACGTACAT GTGGACACAT CTTATCTTCG 
TGCATTCCTT CGAAGGATAC TAGGTTATTT TATCTTGCGC ATTTACCACA TTCATCTAGA
ATTTCCAAAG CCGCACAGTC AGCAATGGGA AAGAAGAAAG GAGGCGGCGT ACGCATTAAG
CAGATGGGGC CGAAGCAGTC GCCGCCAAAT TTAAATCCCA TGGAAGCTCT GCAGATTCCG
CAGGAGGAAA TGGTGCAGCT GCCCTTGTCT CCGGACCGAT CCTATCAAGT ATTCTGGCCA
ATTCAAGAGT CATTTACGAT GAAAACGGAA GGATTTCAAG TAATTTATCC TTCGTACGTG
GATTCAAACA AATCGGTGAA AGAGGGGCGG CGAGTGTCGC TAAAAAATTC AATCCCGTGT
CCAACAGTGA TGGATCTGTC TGAAGCTCTA CAATCGATGC AAGTACGACA TGTGATTCAA
CCGTACAAGG GATACAGTCG TGACATTTCC TGTCAATGGG AGAACCCTGG ACGAATAATG
GTCGATGTCA CGAATCATCG TAAGTTGGAA CTTTTGGTAG AAATGGCGAC ACGGATGGAT
GCTTTACCCA GTCGCGAAAC TCGGCTGGTT CAGGAAGCCA TGCAAAAGGC AGAAGAGGAG
AAGGCGGCTG ACGAAAGGTC GGCGATCGCC GCCGCGGCAG CAAAGTCTTG TGCTCCGAAA
CGAATCACGT CGTCGACGGC CAACAACAAA AAGAAAGGGA AAAAAGGGAA AAAATAAAAG
GCAACAATCA TCTCTTTTAC AGTCTGCAAT GCGCTACATG TGACTAACCA GAAGCATTGT
TGTAAACCTC TTTGTTATTC GGGTGATGAT ACTACCAA
 
Protein sequence
MGKKKGGGVR IKQMGPKQSP PNLNPMEALQ IPQEEMVQLP LSPDRSYQVF WPIQESFTMK 
TEGFQVIYPS YVDSNKSVKE GRRVSLKNSI PCPTVMDLSE ALQSMQVRHV IQPYKGYSRD
ISCQWENPGR IMVDVTNHRK LELLVEMATR MDALPSRETR LVQEAMQKAE EEKAADERSA
IAAAAAKSCA PKRITSSTAN NKKKGKKGKK