| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_44387 |
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| Symbol | |
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| ID | 7198053 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011672 |
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| Strand | - |
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| Start bp | 396958 |
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| End bp | 401623 |
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| Gene Length | 4666 bp |
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| Protein Length | 1343 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002178500 |
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| Protein GI | 219115409 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCGCATTCCA TCATTCTCAA ATTGGGCCAG GCCTCTACTC TAAAATCGTG GCCGTTGGTC
GACGGAACGT GTTTACCTGT GTCGCAAAGG TGCTTTTCGT CGAGGTGCCG ATAGGAGGAA
CAGGCCTGAT TTTCTTTGCT GGTCGACCCC TATTTCACAA TTAGCTTGGG AATCGAAGGG
TTTTTTCTCG TTTTCGCTGG GTCACTACTG TGGTCATACC TGTCGCAGTG TCATTCCGTT
TCCAAAAGTA ACAATCCATT ACGGCCATCG GAGCATTTCT ATCTGCTCTG ATGAAGTCCG
TGAAGAAGAT CTTTCAAAAG AAGAATAAGA AGGAATCGGG AAATACGAGT GCATCACTTT
TGCAGGCTGA GCGACACGAA AGCGATAATA GTAGCGTGAA TGCGCGTGTC GAGGAAGAAA
GCTTGGAAGC GGCCATTGAC CTTTCATCGA CGGCACCCGG CCACGGTTTA GAACCACAGG
CACAACTGAT GGAACCGCCC GCGCCGAGCT TGAAAAAATC AGCACTTCCT CACGTCAACG
AAAATCGCAA CCGACCGAAC ACAAATCGTC CGAAGCAGGC TATGAGCGGC CAACATGAGA
CGAAACCGCC GCTGGTGGAA GAGAATGATC CCGTTCGTAC CGCTGACCAT CATCAAGACA
CGCCCGCAGG TAGGAGCTCG TACGACTTGA TACCGCTATT GGATCAAACC AAGCTACCTC
GTGGAGGACT TAGCATAGAC ACCAAAGCTG TCGGTCGAGT ACAGGTAAGT AGGGAACAAG
GCTACATGGA TTGCCGCTGA TGCTGATCCT GACAAATTTT ACTCACACTA CCATGCTGAT
TTGCTCTTTA GTTCGGCTTG CCCCCCGAGA CCATCAAGGA CAGTATGCAG CTGGGTATAC
CGGTCCCTCA GGTATACATT GTGCCTGTAG AGCGCTTTTG TCGTGAAATG GGGCCTGCAT
TGGGAGTCAA TTTGGCGGAA TTTGAGTTCC CGGCTTACTT TAATTTTTTT GTTTACAAGA
AACGCTGTAC ACTAGTCGTG GATTCAGAAG ACGCCGAAGA CAATATACGG AAAGTCTTCA
GTGAGACACT GCTTGGACCG GCACAGTTCC GCCGGGAAGA AGACCCCTTG GCGTTCGAAG
CGGAAGATTT TGCTAAGGAT TTCCCTAGGA ATGCTATTCC GAACTTTACC AAGGAATTGA
AACACTTTCG AATCATGCCA GACGGGAATG AGCTAGTAAT TGAGACGCTC CTGGAATTTC
GACACTTTGA GATGCGATCG GACGGGCACG AAGGTCTTGG TGTTCCTCCC AACGCAGAAG
GGAAAGTCGA GGAACAAGGT GATGGTTGCA AGAGCGAAGA CGAAGATTGC GGTGCTGAGA
GTGACGCGGA AGAAGAAGTT CCGAAGGACT TGCAAGCAGT CGAATCCAGG GAGCAAGCCA
CTCCCTGGAC ATATTCCCAG GCTCGTTTTA TGGGTAAGTC CTGAGTCGTT CATACGTCGC
ATGTTGTGCA AAGAGTCCTC GTCTCAGTTT CATTTCTCTT GTTGCGATCA TAGGCGATGT
CTCCACGGTT TGGCCGACGT CTGCAACTGT GGATCAAATC AAGGAACGAA GTGTCCCCCG
CGTCGAAATA TTTAAGATGC CTGGCGGAAC TGAATACATC ATTCATGATG TTGATGAAAA
TAACAAAATC ATTGGAAAAG CTCGGTTTTC TGGGCATGTC AAGGTCTCGG AATTAATGAG
CGTCGATGGC TTTGGCGGTC ATTCGATATT GGATGATGTC GGGCCAAATT GTCGCAAAAG
CAAATCATTT GCAGAAGAAA GGGATCTTTC CTCTTCAGCA GATCTAGAAA GATGGTTGAA
CGAGCCGGAA AGAATCCTGC CTCCGCCTTC GTTTCATCCG CCTTCTTTCG GAGTGACTGT
TCTTGGCAAT TCTCACGGCT TCGACAAGAG CGGTTCTGTT TCTGGATACG TGTTATGGAT
CAATGGGCGA GGAGTGATGA TAGATCCTCC TCCTTACTCG TCTGCTACAT TGGAAAGAGA
AGGAATTCGT CCACGAACTA TTGTGGGCAT CATTCTCACC CACTGTCACG CAGATCACGA
TGCAGGAGCC TTTCAAAAAG TTCTGACAGG ATCGCCAGTC GTGGTGATAA CTACACCAAC
AATCTACAAA AGTTTCATTC GCAAATACGC GGCTCTGTCC GCCCTTAGTC CTGCTCTTCT
CCGGCATAGC CATCGCTACA AGCCAGCAAT CATTGGTGAA GCACTTCGTT TTCAAGGAGC
TACGTTTTAT TTTACGTACA CACTTCACAC AATTCCTTGT GTAGGGTTTC GAGTCGAATG
GAGGGGGCGA TCAATGGTTT TTACCGGGGA TCATTTCAAC AGTCCCCCTG CGATAGACAA
GCTTCAAGAA ACAGGTATTT TATCGAAAGC ACGTGCTGAC GATCTCAGAA ATCTTCCGTT
GCAGGACACG GACCTTTTGT TACACGAAGC CGGTGCACCT CCGATTCACA CGCCACTTGA
GGTTTTGCTT CAGCTTCCTA AGGAGGTAAA GAAACGGCTT TATGTTGTCC ACACGTCCGC
TTTGCCTGCT GGATGCGAGC TTCGTGTTGC TCCAACGGGA ACAGCGGGGA CTATTCGCTT
GGATCAGATA GCGAACCAAT CTGACGACCA TGTCCGCCGG GGGAGCCGGC ATAGTGCTTC
ATCAGATTCT TGTAGGGATG GCGAGTACAT ATGGAACGGC CACAGCGAGT ACGAAAGCAT
ATCAGAGGAA GCTGCTGTAG CAAATGCAAA TGTACCTAGT AGGTTAACTG TTCAAAGCGA
GCCCCGTACA ATGATGAATT CGTTCCAGAA CCTTGATTTT ATTGGCGCAA AAGAAAGACA
AGTGAGAAGC GCTTCATGCT TAAGTCACGA TCCCCAGTCA GTTCCGCTTG TTTCAATGAG
GCCTGCTTCG AGTACCGATG CGTGGTTTAT ATTGAACCTA CTGAGTGCGG TGCCTTTTCT
TTCAAGGTGA GGCATTCTAA CAAAAGTGAC AAAAAGATAA CGCTCGGCCT CTGACACCTA
CCTCTTTTCT CTACAGCCTC TCCTATGCAT TTACCATGGA AGTGCTTGAA ACAGCGAAGG
TAGATGCCTA TGCCCCTGGT GCTGTCGTTG TACCCTCTAC TCGACGTAGC CAGCTCTTGT
GTGTCGTTTG GGAAGGTACT TGTACGGAGA AAATTAGTCA AGGAGGCAAT CCAAGAAATA
CGGGCGGCAC CTTGAAAATG ATCGCGGAAG GTAAGGAGAT CCCTAAGGCG GTATGGCACG
CCGGTGACTG GACAGGTCCG GTCGCGCTGC AGCCGGACCT TCTTTTGAGT GGGGAAAGTG
ATACTAGCGA CAATCACGAC GTTGTAGCGC TTTCCACGGA GGGAGTGAAG GTCATAACAG
TTGAATTTTC GAGTCTTCAA ACTATCCTAA AGAGTGGTTC GCCTTTGTAC CGTAAGTATC
TCGATCGGAA AGCCCAACAG GGCAGGGCAA AGAGAGAAAC GAGCTTCGAA AACGGCTCTA
CTGCGACTGA TGAACTTTAC CAAGAGGCGG TCCGAAGCTT GAATGTATTG GAGTTATTAA
ATGGCAACTC TGCTCTACGA AAATTAAGTG CAGTCCAGAA GAGACACCTC GAGAGCTTGG
CAGAAGGTCC CATTTGTTTT CAACCTGGCG AACGTTTGTG GCGATCAGGT GCTCCGGTTG
ACCGAGCCTT CATTATGGTT TCTGGAACTG CTTCTTTTGT CCCAAAGCGC CGCAATGCAG
GTTCGGCGGC TGTTCAAGCG AAGGATATCG TCGAGCATGA CAGAATGGGC GATTTGAGTG
TATCGGAATC GATGAGAGCT GATGCGCAAA AAGTTATGAG GGAGCTCGGT GTACGTCAGG
CGGACTCACT TGGTGGCGAC GAATCATCTA TGTCGTCGGC TGAGCACGAC GATCAGAAAG
TTGTACAGTT TGACCATGTC TTCAACCGTT CTGTAAGCAA TGATACTCCG TTCACCGATG
CTCACGATTA TGCCAAACTT AGCAGAGGTT TGCAAAAACG AGCAGATTAC TTATTGAAGG
AAGGCTCTCG GGAAGGTTCT GTCGTCTCGA ATATTTCGAC CGACGACTCT TTAAATGACA
TGGACAGCTG TGACAACGAA AGTGAAGGGC AAGTCGATTA CACCTTCACC GACGATGCTG
ACGCGGGCTT AAGATCCAAG CGCAACTCCA TCATCCGACG ACGATCGTCG AGGGCACGCT
TTGCGAACAA GGTTCTAGGA CGGCTATATA GTCGTCGAGC ATTTACCGGT GGCTTGGTGT
TCAGTCGAGG TCACTTCCTG GGGGACGTCT CGAAAATGGT TGCTGGTCTC TTGTCTTCGG
AAGGTGTTTC GGAAGTGAGC GACGACTACG GATCGGCGTA TGGTTTTGGA GACAAACCTG
AGGGAGCGGA CTACGATCTC TTGGAGAACA TGACTGATCT GGTTATTCAT GAGCGAGAAG
GAGACCACCA TGTTATGCAC AGTTCAACGT TGACCGCTGG GAAACGCGGT TGCGTGGTTC
TAGTGTTTCC AAAGGCGAGT CTTATTCCGT TCTTGGATGA ATATCCAGGT CTTTTGCTTA
GTGTTCTCGG TACGCAGGTA GTAATTTAAA GAAACCTTTA TAAAAC
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| Protein sequence | MKSVKKIFQK KNKKESGNTS ASLLQAERHE SDNSSVNARV EEESLEAAID LSSTAPGHGL
EPQAQLMEPP APSLKKSALP HVNENRNRPN TNRPKQAMSG QHETKPPLVE ENDPVRTADH
HQDTPAGRSS YDLIPLLDQT KLPRGGLSID TKAVGRVQFG LPPETIKDSM QLGIPVPQVY
IVPVERFCRE MGPALGVNLA EFEFPAYFNF FVYKKRCTLV VDSEDAEDNI RKVFSETLLG
PAQFRREEDP LAFEAEDFAK DFPRNAIPNF TKELKHFRIM PDGNELVIET LLEFRHFEMR
SDGHEGLGVP PNAEGKVEEQ GDGCKSEDED CGAESDAEEE VPKDLQAVES REQATPWTYS
QARFMGDVST VWPTSATVDQ IKERSVPRVE IFKMPGGTEY IIHDVDENNK IIGKARFSGH
VKVSELMSVD GFGGHSILDD VGPNCRKSKS FAEERDLSSS ADLERWLNEP ERILPPPSFH
PPSFGVTVLG NSHGFDKSGS VSGYVLWING RGVMIDPPPY SSATLEREGI RPRTIVGIIL
THCHADHDAG AFQKVLTGSP VVVITTPTIY KSFIRKYAAL SALSPALLRH SHRYKPAIIG
EALRFQGATF YFTYTLHTIP CVGFRVEWRG RSMVFTGDHF NSPPAIDKLQ ETGILSKARA
DDLRNLPLQD TDLLLHEAGA PPIHTPLEVL LQLPKEVKKR LYVVHTSALP AGCELRVAPT
GTAGTIRLDQ IANQSDDHVR RGSRHSASSD SCRDGEYIWN GHSEYESISE EAAVANANVP
SRLTVQSEPR TMMNSFQNLD FIGAKERQVR SASCLSHDPH LSYAFTMEVL ETAKVDAYAP
GAVVVPSTRR SQLLCVVWEG TCTEKISQGG NPRNTGGTLK MIAEGKEIPK AVWHAGDWTG
PVALQPDLLL SGESDTSDNH DVVALSTEGV KVITVEFSSL QTILKSGSPL YRKYLDRKAQ
QGRAKRETSF ENGSTATDEL YQEAVRSLNV LELLNGNSAL RKLSAVQKRH LESLAEGPIC
FQPGERLWRS GAPVDRAFIM VSGTASFVPK RRNAGSAAVQ AKDIVEHDRM GDLSVSESMR
ADAQKVMREL GVRQADSLGG DESSMSSAEH DDQKVVQFDH VFNRSVSNDT PFTDAHDYAK
LSRGLQKRAD YLLKEGSREG SVVSNISTDD SLNDMDSCDN ESEGQVDYTF TDDADAGLRS
KRNSIIRRRS SRARFANKVL GRLYSRRAFT GGLVFSRGHF LGDVSKMVAG LLSSEGVSEV
SDDYGSAYGF GDKPEGADYD LLENMTDLVI HEREGDHHVM HSSTLTAGKR GCVVLVFPKA
SLIPFLDEYP GLLLSVLGTQ VVI
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