Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44306 |
Symbol | |
ID | 7197968 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | - |
Start bp | 177970 |
End bp | 180768 |
Gene Length | 2799 bp |
Protein Length | 865 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178446 |
Protein GI | 219115301 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.677805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCCGTAACGG AGACATTTTC TTCACTACAC GCACACGAGC ATTCCAAAGC TTCTTGTACG GGCTCGCCTT CGAGAAATTC AATACTGATG CTATGAGAAG GCTTTCTGTC ATCGTCTCTC TGTTTTTCAA AGTAGTTCTT TCGAGATTTG GATCCACCCT CGCATTCCTT GGTCGCACTC GCTTTTTCGG TCATGACCGA ACTATCGTCT CCCAAAGTTT TCAGTGGTAT TCACCGTCGT GCATTAGCGT CGAGCGCAGA ATGCTGCAAT CGTTGACGCT CTTCAGTGCA ACGGGCTTAT CTCAACATGT TTCTGTTGGA GATTTTGTTG GAAGTGGATC ATACGGTACA GTCCACCTCC TCGATGTCGA TGGTGCGACG GTCGTTGGAA AACGCGCGTG GACTAGGGGA GAGCTGCAAG AGCAGCACCC GACTTTTAGA GAAAAAGACT TGTATGAGAA GGAGGGCCGC TGCCGCTCCT ACTGGAGAAC GGAAGAGCAC TGTTTTAAAA AACTTGGAAG CTTTAAGGGT ATTCCAAATT TCCGTGGGTC GCGTATGGAC TCGGAAAAAA GGAACTGGAT GTTATTTGAT CCTATACTAT CATCCAAATC CAGCAGACCA GCGTCATCCT TACTCGAAAT TATGGCGCAA GACAGGCTCA CCTATCAAAA TGACAAGGAA AATCATCTTT CCCTTCTTTC AAAACATTTA GTCGTATCAA CAAAGAGGGA GAAAGTAGCA TCTCTAACTG AGACTTTGGA TATCGTGCTG GAACAGCTTT TGGAGGTGCT GTGTTTTGTG CATTCGAACA AGGTTGTTCA CCGTGACATC AAACCTGGAA ACTTGCTTGT GGCATCGGGT CGTCTGATTC TCCTGGATTT TGGGTCTGCA GCTGACATGG AAACCGCTGG CTTGCTGAAA AGTAATATTG GACTAAGCGA GACTGTTGCT GTGAGCCCAA TATACGCGGC CCCCGAACTT TTTGTTGATC CTAATCGTGA TCCTGAAAAG TTTGACTGCT TCAGTGTAGC ACTATTGTTT TGCCAGTTGC TTTTTCAGTA TCTGGATGAG CGCATAGATG CAGGATTTCG TCAGCAGTTG GAAAAGGCCA ATTTTAATTT AGATGCGTGG CTACAAACCG AACTACAAGG TAAAGTTCGC CCATCTGGTT TAGAAGATGC GCTTGAGATT TTAGAGGAAC GCCCTGGTCT TTGGAACCTA CTGCAGGCCA TGCTTCATCA AGATCCTGTG TTTCGCCTCT CAAGCCAGGA CGCTCTAAAT CAATGGCACA GAGTAAAGGA TAGACAAGTT CTGCGTGATG TTGACGGCTC TTACTTGATG GAGGTCTTGG AATCCCTCGA TCTTTGCATT ATCCCACCTT CAAGACCTCT GCACTTTGTG GCAACGTTCG ACCGAAATGA GCCCTTAGGC CTGTTGCTTG CAGAATCCGA CACGGACTCC AGCAAAATAG AAAATATTGT AGACGCCAAA AGATGGACCC AGATAAAGGA AGATGCTATT TCCGGAGAAG TGTACGTCCA GGGGATTATA CATGATGGGC AAGCCGAATC TATGGGAATC TTTGAAGTAG GAGATCGCTT ACAGGGTGTC GGTGAGCTCC CATTAGCCGA AGGAGGATTC CAAAGGGCCA TTAATATGGT AGGTGGTATT TTCATGCTCT TCTTGGTATC TCTGACAACA GTCTAATACC TACATATTCC TTTGACGAGA AGCTTCAGGA TCAACCAAAG AAGGCCAAAT TTGTCACTTT GCATTTCGAT CGGAAAGCCA ACGTTGTTGG ATCAAACGAT AATTTACCCA TTGCTTCAAT GGAGGGCCCC ATAATTGTAG CGGACCAAGG AGCTTGGTCC CGTAGGGGGA AGAGATTCGC ACAGGAAGAT GCTTTCATTC TACACGAAGT TCACGACACG AGAGAGCGGT CTGTGCTCCT AGCTGGTGTC ATGGACGGTC ATCTGGGAAC GGCGGCATCC AAATTGGTGC AAGCAGAGCT TCCGATTCAC TTCTCCGACG AGCTTTTACG ACACCTGGGC AAGAGCACAA GCGAAATGCT ATCGGCGGCG TGGGAAGCAA CGTCTCAATC TTACTGGGCA AACTGTTTGT CTAGTGACGA ATGTGTTGCA GACTATGACC CAAGGGAAGG ATTTTTGAAC GCAAATACGG GGTCAGAAGA TGCTGTTGCT GGGACTACAG CAGCGATTAT GGCATTGGAC AAAAAGCTGG GTCACATAGC TGTGCTAAAT TGCGGTGACT CTCGAGGTGT GATTCTGAAC TCACAGGGTC TTCCCATTTT CCAGACAATC GATCACAAGC CGGATATGGA TATGGAAAGG CTGTCGGAAG GAAGGAAGCT GGGCAAGGAT TACAGTTTGC CTCAGTGTAG GTTTTCTAAA TGGTTTCTGT TGGTGGGAGA ATATGAATAC GCTGTGAGCC GCTCCCTGGA GGGACCTCTT GCAACCTCAA AGGGTATAGC CAATACTCCA GACATATCGG TGATTCAAGC AGAAGCAGGA ATGTCCGGCT TAATTGCAAG TGATGGACTA TGGGAAGTCA TTGATACCGA AGAGGTGTGC CTCATTTTGA CAAATTTGAG GGGCATGGGC AAAGGCGCAG GAGATGCAGC AAAGACCATC TGCTCCATGG CCATCGAAAG GGGATCTTCG GATAATGTGA GCGTTGTTAT ATTGTATCTA GAATAGCGGT TAATAGAGGC TGTTACTTTC GCCTCGGACG CAAGCAACTT TATCGAGTTT AATCTAAATC CGGAGTTTTA AAAACATGT
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Protein sequence | MRRLSVIVSL FFKVVLSRFG STLAFLGRTR FFGHDRTIVS QSFQWYSPSC ISVERRMLQS LTLFSATGLS QHVSVGDFVG SGSYGTVHLL DVDGATVVGK RAWTRGELQE QHPTFREKDL YEKEGRCRSY WRTEEHCFKK LGSFKGIPNF RGSRMDSEKR NWMLFDPILS SKSSRPASSL LEIMAQDRLT YQNDKENHLS LLSKHLVVST KREKVASLTE TLDIVLEQLL EVLCFVHSNK VVHRDIKPGN LLVASGRLIL LDFGSAADME TAGLLKSNIG LSETVAVSPI YAAPELFVDP NRDPEKFDCF SVALLFCQLL FQYLDERIDA GFRQQLEKAN FNLDAWLQTE LQGKVRPSGL EDALEILEER PGLWNLLQAM LHQDPVFRLS SQDALNQWHR VKDRQVLRDV DGSYLMEVLE SLDLCIIPPS RPLHFVATFD RNEPLGLLLA ESDTDSSKIE NIVDAKRWTQ IKEDAISGEV YVQGIIHDGQ AESMGIFEVG DRLQGVGELP LAEGGFQRAI NMKLQDQPKK AKFVTLHFDR KANVVGSNDN LPIASMEGPI IVADQGAWSR RGKRFAQEDA FILHEVHDTR ERSVLLAGVM DGHLGTAASK LVQAELPIHF SDELLRHLGK STSEMLSAAW EATSQSYWAN CLSSDECVAD YDPREGFLNA NTGSEDAVAG TTAAIMALDK KLGHIAVLNC GDSRGVILNS QGLPIFQTID HKPDMDMERL SEGRKLGKDY SLPQCRFSKW FLLVGEYEYA VSRSLEGPLA TSKGIANTPD ISVIQAEAGM SGLIASDGLW EVIDTEEVCL ILTNLRGMGK GAGDAAKTIC SMAIERGSSD NRLIEAVTFA SDASNFIEFN LNPEF
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