Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_44255 |
Symbol | |
ID | 7197938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011672 |
Strand | + |
Start bp | 20551 |
End bp | 22103 |
Gene Length | 1553 bp |
Protein Length | 397 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002178151 |
Protein GI | 219114711 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAACTAGCGA AACATCTGAG GGTGTGGTGC ATTCATTGAT TGTCAATGTC AATATCAGCT CATACATATA CTCTACTTCA GGTATCTCTA GAGGACGCCT TTCAGCTGAC TGCTTAGGAG CATGGCGTCC ATGCGTAGTG CTGTGCACCG GCACCATTTT TCTGCGTTGC TGCCACGCGT GGACAGCGAT GGTGACGAGA CCAAGGAAGG TGATACGTCG AAACGGAGGC GCGGTAGTAG TCTTTGCTCT CTTTACAACC ACAAAAACGT CCAGCGGAAT AGATTCGTTG TTGTTTTGTT GGTGCTTATT CCACTGGCTT GCTATTACGT CTACGTACAC GCAACATCCA AACGAGCGCA GCTTCTTGCA GCAGGTATTC CCAAAGTTCA TCCGTCCGTC CCACTCGATT TCATAGTCGC CGGCTTTCCG AAGTGCGGTA CCACCACGCT ACTGTACGCG TTACACAAGC ATCCCGAAGT TGCCATGTCA CCGATAGAAA ATTGTCAAAT TGCCCGACCC ATCCAGCAGG ATGACGTTAA TTTGAAACGC CTGAACAAGG ACTTGCTCCA ATTGGACGCT ACGCCCGACG AGTCGAACGA TATTATACTG AAGAAACGAG GCATCAAATG CCCAGATGCA CTCCACACCT ACAAGGTGAT TCACCGACTG GCCCAACACT CGCCTTCTTG TAAGTTCGTC ATCGGCGTGC GACATCCCAT ACAAATGCTT CAATCCTTTT ACAACTACCG CATCACCGAA ATTTACGATA AAAGTCTACC GAAAGACAAC ATCCCGGATC TAGTCGATAT TCTGCAAGGG ACGGTTCCTA TTTGGAAGGA TGTGTCTATT GACGTGGCGC GATTTGAACT CTATCTCCTG CAACTCGCCA AAACAGCGTT GACCCTTGCT GATCTCGAAA CTTTGCAAGA ACACGATTGG TTGGCCGTCA AACCAAACAG GTTCGACGTT TTTCTTTACA CGTTGGATCA AATAAATGAC GAAGATGTTT CACGGGCTGC AGCTTTTCGC GGTGATTTGC AATCGTTTTT GGGCTTGTCT AATCCGTTGG AACCCCTCGG ACACGAAAAT TTGAATCACT TTGTTGGTGG TCAAGCCCAT ACCGAGACGA TAGATATATG CGAGCCGCAT TTTGACGGCG TCCGCGAGGC CTTATTGCGC AACAGTCAGG CGACGGCCGC GTGGATTCGC ACCTTCATTG ACGCACCAAC CGTGACCGTT AGTAATCGCA ATCACGTTTT GGAGACCTTG TCCGCCTGGG ATGTCGATCC CTGTAGTGTC GAAGAGACAA GATGACACCG GGCGCTACCT ACTTTTTCTA AACAAGGTTA TCTAGAGCTT TGCTGCAAAG CACCCACATC ATGCGTGCCA TCACACAATG CACGCCTTTC TCTCGTCCTT GGTTCCGCTA ATGCACTGTA GTCTCTATTG CGGCCAATCA AGCCATTGGC TGTGTGGATG CTGGATGATC CTCGTGCTAC TATTTCCTGG TAGAGTTTCA ACCAAATTGC GGCTTCGAGT AAATCAGAAT TCG
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Protein sequence | MASMRSAVHR HHFSALLPRV DSDGDETKEG DTSKRRRGSS LCSLYNHKNV QRNRFVVVLL VLIPLACYYV YVHATSKRAQ LLAAGIPKVH PSVPLDFIVA GFPKCGTTTL LYALHKHPEV AMSPIENCQI ARPIQQDDVN LKRLNKDLLQ LDATPDESND IILKKRGIKC PDALHTYKVI HRLAQHSPSC KFVIGVRHPI QMLQSFYNYR ITEIYDKSLP KDNIPDLVDI LQGTVPIWKD VSIDVARFEL YLLQLAKTAL TLADLETLQE HDWLAVKPNR FDVFLYTLDQ INDEDVSRAA AFRGDLQSFL GLSNPLEPLG HENLNHFVGG QAHTETIDIC EPHFDGVREA LLRNSQATAA WIRTFIDAPT VTVSNRNHVL ETLSAWDVDP CSVEETR
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