Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43560 |
Symbol | |
ID | 7197299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | + |
Start bp | 817117 |
End bp | 818558 |
Gene Length | 1442 bp |
Protein Length | 361 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177694 |
Protein GI | 219111885 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTCTTACCAA AAGAATAAGA CGAAAACAAT GCTTGGAGCT CCCGCAATCA ACACTCGCAT TACAGCACTT CTCAAGTGCA GGTACCCGCT GGTGCTTCCA GGAATGAGCT GGATCTCGAC GCCGGAATTG GTGGCGGCGG TATCGAACGC GGGTGGCGTG GGTATTCTGG CGACGGGTCC TTTGAACGCC ACGCAGACGC GGGAGTCCAT ACGACGAGTG AGATCACTCA CGGATAAACC CTTTGGTATT GGCGCCACGT TGCTCATGCC AGGCGCTCGG GAAAATGCTG TTGTGGCCTT GGAAGAGGAA GTTCCGTTGA TTAATGTCAG TCTCGGGAAG GCCGAGTGGA TAGCGGAAGG TCTACAAGCG TATGGTGGTA CGTTGTTGTC GACAGTCACG AACGCGAAAC ACGCCGAGGC TGCCATTCAA GCCGGCGCGG ATGCGTTGAT GGTCACCGGT CACGAAGCTG CGGCACACGG AGGTGACGTG ACTTCGCTAG TCCTCGTGCC TTCGCTAGCG GCCCATTTCC CGGAAACTCC AATCGTGGCG GCGGGTGGCT TTGCCAACGG ACGGGGTTTA GCTGGTGCCC TGGTGCTGGG AGCGGATGCC ATCGCCATGG GCTCCAGATT TGCTGTCACC AAGGACAGTC CTCTGGCGCA AGCTACGAAA GAAGCCATTG TCGATGCAGG AGAGTCCGAA ACAATATACG GCAAAAACTT TGATGGCATT CCGGCGCGTG TTTTAAGGAC TACAGCTTCC CAAAAGGTCA TGGCTAGGCG GCCGTTTCTA GCCACTATTG TGTTTCGAGC GTTCCAGGCC GCGCAGAAGC TTGGCATGCC GATCTGGAAA GTACTTCCCG GGCTGCTTAC GCAATGGGAC AAAATGTTCA TTGTGGCACA GTTTGGAGCA GCGACGGAAG CAATTACCAA GGCGACCGTA GATGGCAACG TAGCGGAAGG CGTGCAATTT ATCGGACAAA GCGCAGGAAT GATCAACGAT ATCCCATCCG TTGACGACCT CGTGCAACGG ATCATGGAAG AAGCACGACA CGTGTCGACG GAGAAAGCGT GTCTTTTTGA AGAGCTTGAC TTTGTCAGTA ATAGAGTCGC ATAAAGATAG CTCTTGAGAA TAAATAAGGA TCGATCGTTT GTCAAAAAAC CCTATGGTCT TCCTTTCCAA GGCGTTTCTC GAATTGTCAG AGATACACGG CGGTCGGAAA GTAAATCGTT ATTTGCGATA CCGTGCGAAA AATCGTAGCG GGCCTTGCCG GTCAGTACCT GTAGCGTTCT TGGTCTCAGT AAGACACGAC GTTCCTCAAC GGCAAGATTT CGTTCACGGT TTTGATTACG AAACGTCATG TAGCAGCTTC CGGCCAAAGA GAGATTCGCG ATTGGTTCTT TGTGTTTTTT CCGATCATCA ACATGGCTCG TTAACGCATT CC
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Protein sequence | MLGAPAINTR ITALLKCRYP LVLPGMSWIS TPELVAAVSN AGGVGILATG PLNATQTRES IRRVRSLTDK PFGIGATLLM PGARENAVVA LEEEVPLINV SLGKAEWIAE GLQAYGGTLL STVTNAKHAE AAIQAGADAL MVTGHEAAAH GGDVTSLVLV PSLAAHFPET PIVAAGGFAN GRGLAGALVL GADAIAMGSR FAVTKDSPLA QATKEAIVDA GESETIYGKN FDGIPARVLR TTASQKVMAR RPFLATIVFR AFQAAQKLGM PIWKVLPGLL TQWDKMFIVA QFGAATEAIT KATVDGNVAE GVQFIGQSAG MINDIPSVDD LVQRIMEEAR HVSTEKACLF EELDFVSNRV A
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