| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43495 |
|---|
| Symbol | |
|---|
| ID | 7197190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011670 |
|---|
| Strand | - |
|---|
| Start bp | 629302 |
|---|
| End bp | 630830 |
|---|
| Gene Length | 1529 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002177972 |
|---|
| Protein GI | 219112441 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000588522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GACTTTTGCT CATCTACTCT CACCATGAAA TCCGTTTCTG CTTTCTTGTT AGCTTTCCTA
GTGTCAGTCA CCGCGGCCAA TCTCATCACC GATGGTAAGT TGCACTAATG TCCGAAAAAT
GCTAGGAAAT TTGGGAACTG TTGATCACTA TCCACCTGAT TTTCGATGGT GGAAGAAAGT
GAATGCACGT GGTTTCTTAC ACTCAGTAAC TCCTGTCATT GGCCCCTGAC CTCTCTGTAG
CCGGACATCG TAAACTTGAA GAAAGCAGCA GGTGTACTAG CAAGACCCTG AATTTCGACC
AGTTCAGTGC CGGAGATCTT ATCACGAATG AAAAGTTGAA GCAAGAGTTC AAGTCACTAG
AGATCTCTGT GAAACCCGAT GGAAGGTGTG CGTCTGGTAG TTTGGCCCGA ATTTTCGACA
CCGAAAACCC GACCTGCGAA GATGATGACT TGAAGACTAG TGGGGAAGGC ATGGCGGCCA
TTATCCAGGA CAAAGGAGAT TGCGCTCCGA ATGACTGTCG ATTTGGAGGC GAAATGATAT
TCTCCTGGAG CAGCAAGGTA ACCCTCAACT CCATTCGTCT CTTGGACCTC GACCAATCAG
TGGCTATTAA ATTATTCAGT GGGGATACGA ATGTGGCTAC CATCAATACC CCAAAACTTG
GAGACGGCCA GCACCAGACT TTCACCATTG GCAAATCTGA TATCACTAAG ATGGTGTTGG
TTCACTCAGG ATCTGGTGCA GTTGCAGAAG TTGATTACAC AACTTGTGGC CCTGGCGCCA
ACGGAGATCC TCACTTTCAC ACATGGACTG GGCACAAATT CGATTACCAC GGGCAGTGTG
ACCTTGTCTT TATGAAGGCT CCCTCTTTTG AGGGTAGGGG TCTCGAGATT CACGTGCGCA
CCGAGCAGCG CTACTTCTTC TCTTTCATTA AAACGGTAGC AATGAAGATT GGAGATGATT
TACTGGAGTT TGGATTCGAT CAAGTGCTCC TGAACGGTAG CCCAGCTCAC GAAGGTTTGG
CATCGGGCAG CAGCTTCGAC TTTGCGGGAT ACCCTGTGTC GTTCCACGAC GAGCCCATGC
CCAACGGCCG TCCACGTAAG CTCTACCGTG TCCACACTCC CCACGATACC GTCGACATCA
AGGTTTTCAA GCAGCTGATG GCCATAGAGA TCGAGGATGC GTCTCACGTC AATTTCATTG
ATTCGGTCGG TATCACGGGC GACTACAACT CTGGCTTGAT GCTTGGCCGT GATGGTGTCA
CTGTTTTATC GGATCCTAGC GACTTTGGTC CGGAGTGGCA AGTCACCAGC GACGACCCCA
GCTTGTTCAG TTCTGTTCAG GCTCCCCAGT TCCCTGAGAA GTGCTGGGAA GCCGCGGCTA
TTGATAAGGT CCGCCATTTG CGTAATGGAG TGTCGCAGGT GCAAGCGGAA GAGGCCTGTG
CTATCTTGGG AGAAAATGCT GACATTGAAG ACTGTGTGTT TGACATTATG GCCACCGGAG
ATATCGAGAT GGTCGGTGCG CACCTTTAA
|
|---|
| Protein sequence | MKSVSAFLLA FLVSVTAANL ITDAGHRKLE ESSRCTSKTL NFDQFSAGDL ITNEKLKQEF
KSLEISVKPD GRCASGSLAR IFDTENPTCE DDDLKTSGEG MAAIIQDKGD CAPNDCRFGG
EMIFSWSSKV TLNSIRLLDL DQSVAIKLFS GDTNVATINT PKLGDGQHQT FTIGKSDITK
MVLVHSGSGA VAEVDYTTCG PGANGDPHFH TWTGHKFDYH GQCDLVFMKA PSFEGRGLEI
HVRTEQRYFF SFIKTVAMKI GDDLLEFGFD QVLLNGSPAH EGLASGSSFD FAGYPVSFHD
EPMPNGRPRK LYRVHTPHDT VDIKVFKQLM AIEIEDASHV NFIDSVGITG DYNSGLMLGR
DGVTVLSDPS DFGPEWQVTS DDPSLFSSVQ APQFPEKCWE AAAIDKVRHL RNGVSQVQAE
EACAILGENA DIEDCVFDIM ATGDIEMVGA HL
|
|---|
| |