Gene PHATRDRAFT_43430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_43430 
Symbol 
ID7197152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011670 
Strand+ 
Start bp444539 
End bp445116 
Gene Length578 bp 
Protein Length184 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002177617 
Protein GI219111731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00586531 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATCATGAAAG ACACGAACGC GCCCTGGACG CACGTTGAGT TCGAGACGTC CATTGGTTCC 
TTCAGCATCG AACTGTACCA CAAGCATACA CCGCGCACGT GTTACAACAT TGCCGCTCTG 
GCGTACCAAG GCTACTACAA TGGCACCATT TTCCACCGCA TTATTCGTGA TTTCATGATC 
CAAGGTGGCG ACCCCACAGG AACGGGACGC GGTGGGGAAT CTATCTACGG GGGAAAGTTT 
GCCGACGAAA TCACGCGCAA CCTTAAACAC GTGGGTGCCG GGGTCGTTTC CATGGCCAAT 
GCCGGTCCCA ACACGAATGG ATCGCAATTT TTTATTTCCC TTAAACCCAC CCCCTTTTTG 
GACGGAAAGC ATACCGTGTT GGGTCGGGTG TATTCCGGTA TGAGTGTTGT GCAGCGCATG 
GGGATGGTAG CGACGGACGG AGAGGATCGG CCGCTGCATC CTGTGACGAT CTATACCGCT 
ACACCGTTGC GGGAACCGCC GCTACCCAAG TCGGAACGAA ACACCGAAAC GACTTCTTTG 
CAAATAAAAG CTAGCTAGAC CAGGGCTACT TGCTGACT
 
Protein sequence
MKDTNAPWTH VEFETSIGSF SIELYHKHTP RTCYNIAALA YQGYYNGTIF HRIIRDFMIQ 
GGDPTGTGRG GESIYGGKFA DEITRNLKHV GAGVVSMANA GPNTNGSQFF ISLKPTPFLD 
GKHTVLGRVY SGMSVVQRMG MVATDGEDRP LHPVTIYTAT PLREPPLPKS ERNTETTSLQ 
IKAS