Gene PHATRDRAFT_43397 details

Gene Information

• Locus tag: PHATRDRAFT_43397
• ID: 7197132
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011670
• Strand: +
• Start bp: 343869
• End bp: 346370
• Gene Length: 2502 bp
• Protein Length: 386 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002177602
• Protein GI: 219111701

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00959094
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTTCACTTGT CCACTTTCTT ATCGCTTAGA GAGCACAATC ACCAGTCTCT AGAGAGCACG 
GTCTTTTAAA AAAGCGTGTT ATAGATTACT CACTCGTATG ACAGATACGG ATAGTGACGA 
CGAAAAATTA GCACCTGCGG CTCGTGGAAT GGCTGCGGAA TCCGGTGGCA CTGCGACCGC 
CGCAGAACCT CACTTTGTCT ACAGGCAGCA GTGGCGTTCG TGTCATCCAT CAAATCCTGA 
AACAGTCTCT CGCTTTCAAG AAGAAACGAA TGCTTTGAAA ATTCCAGAAA AGGCGGCGTA 
TGTACAAGCA ATGTCATGCT GCCCTGAAAT CGTCCACAGA GAGTCCAATC TGTTACTCTT 
TCTACGCCAT GAGAATTTCA ACTTTCCCGC TGCGACCAAA CGGCTGGCCC TGCATTGGAA 
ACATCGACTA GAGTATTTTG AAGACAGGGC TTGGCGACCT CTCTTTGACT TTTCGGGGCA 
TGGTGCGTTA ACAAGCGACG ATATTGCAAA AATAAAACTG GGGTTTCTGG CAAAACTTCC 
AGCGGATAAT GAAGGACGTC CTGTCATTTG CGTCGATCGT AATAGATTGG ACGGAATGGG 
CGATGAGGTG AATTCTGCAC GCATGCGCAT TCTTTTTTTC TGGCTCTCAT TTATTTCCGG 
CTTTACAAAC GTGCAAGATA AAGGGTTCGT TGTACTGAGG GTCACGAGAG GGCAAAGCAT 
TGGGAGAAGC GGGTTGGCAA AAGTTCAAAA TTTAGTGCGT GATGCCATGC CACTAAGAAT 
TGCAGCTTTT CATATATGCT CACTACCACC GCCAGGAGGA CGAAAATCTT TCTCAGACGT 
AGTAGTTCCG ATTGTTCTTC AGCTGATGCA ACGTGCACTA GGAAGGAGGG CTAACGTGCA 
TACAGCATCC ACTGGTGCGG AAATGTTAGA GAAGCTTAAA CCCTTTGGGT TGAAAAAAGA 
TTCTCTTCCA CGCATTGTTG GGGGGTCTTG GAGCTACGAA AAATTGGACG CCATTATTTT 
GCAGCTTTCG GCAAGGTTCA GAAATGGTGA AGGAGCAACT GCTGATGTAC AGAGTAGCGA 
TGCTGGTAAC AATATCCGGG CCAATCCTGC TACCGGCGAC GAATTTTCGT ATTTGACAGA 
CCGAACTGTC TCCATACGGA CCAGGCATGT GGAGACACAG AACCGAAAGT TTATGAAGCG 
AAAAATGGAT ATGGTTCAAC AGAAGCATAT GCAATCTGAA GGCGAAAGAA GGTTGTAGAT 
TATGACTGTT CAATCTTTCT CTCATCCTGA GCTCAAGGAA AGACGGATAC CCCCTCGTTA 
CATTGATTTC GCCGTCAGTG CCGTAAATCG AGGTTATCCT ATGAAATGGC AACAGCTCGA 
CAAATGTGAC GCTTCGAGGT TATTGTATCC TTTGTGTCCC TCTACTAGTT CCAAGAATTA 
CCGAAACGCC AGTAGTAAGT GGTACACGTT TCTGCAGAGT CCCAGTCACG GTCCTTGGTA 
ATTGCTTTGC TTTTGGATAC TTAAACGCCT TCATGTTCTT GGCTGCTCAA ATGAAGGTCG 
AGCTCTTGTT GACTTATCTG GCCAAGGCTA CCTAGATGAA AAAAATCTCG AGTGCACGAG 
AAATGGATGG GTGGTAAAGC TACGGACGAT TCTAGCGGTA AGGCTGTGTT GTGTATGAAT 
TACTCCAGTT TACAAGGCGT ATCCTTCTCT GATGTAAATG AAGTGAGGCT TAAAAAAATT 
GGTCTTTGTC TCAAGTATAT TCTCATTGCA GAATGGCCAG ATCACCAGAG GTGTAGTATG 
CATCCGTCAT GTTGAGCGCC CTGTTTTAGA CGGAGCTTTG AAACCCCGGA TGCTGAAATA 
TGTAAAGAAG TAATGTCTGT CAAGGTATAA GGGTTTCATC TATGCTGCTT CCAACTCAAG 
TTGGAAAATC GGACGCATTC GGATAAGCTG GTCCCTCTTC TCATCAGCTT CTCAAGGCTG 
CCTTCAGAGG GAAGGATTTT ACACTTATTA TCGGACGCCA CAACAATGGC ACCTAAATAT 
TTCCGCATGA GATTGCGTCA AACATAGTAC CCGCAAATCT TGGGGCGTGC GATTGTACGG 
CAACTTTGAG GCTTGTTTGA TGCCAGCTGT TCAGTGCAAG ATATAAGCTT TGTCGCTTCC 
GCTGGGCTCG ACTGAAAGCC TAATGATAGT CCCGTAGCCA AGGTTCAATG CGTGCACCCG 
CCTTTGTCTA AGGTCATTAT GCTGACGCAT GCGAAATTGC GAAAGGGACC AGCTGAGTTG 
GAGTAGAATG GGAAAGTGCG TAAGACGCAA AATTGCTCGG TTTTCACTAA TGTAAACAGC 
TTTCGCTTGA CTGAAGCAAC TTCATGAAAG CAGCTCACTA ACAGTGGGGG AAGGTACCTA 
CTCGCAGAAA CACAAACGAT CCCAGATTGA TTGCAGCGAA TTGGCCTGAA TTTCAGAATT 
GCAAGGGCTA TAGCTCTAAA AAAAATTAAA AAAGCAGATA TG 

 

Protein sequence

MTDTDSDDEK LAPAARGMAA ESGGTATAAE PHFVYRQQWR SCHPSNPETV SRFQEETNAL 
KIPEKAAYVQ AMSCCPEIVH RESNLLLFLR HENFNFPAAT KRLALHWKHR LEYFEDRAWR 
PLFDFSGHGA LTSDDIAKIK LGFLAKLPAD NEGRPVICVD RNRLDGMGDE VNSARMRILF 
FWLSFISGFT NVQDKGFVVL RVTRGQSIGR SGLAKVQNLV RDAMPLRIAA FHICSLPPPG 
GRKSFSDVVV PIVLQLMQRA LGRRANVHTA STGAEMLEKL KPFGLKKDSL PRIVGGSWSY 
EKLDAIILQL SARFRNGEGA TADVQSSDAG NNIRANPATG DEFSYLTDRT VSIRTRHVET 
QNRKFMKRKM DMVQQKHMQS EGERRL