| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_43354 |
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| Symbol | |
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| ID | 7197398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011670 |
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| Strand | - |
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| Start bp | 206134 |
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| End bp | 209172 |
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| Gene Length | 3039 bp |
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| Protein Length | 909 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177885 |
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| Protein GI | 219112267 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0648253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GACAACAAGC GCACACCCGA TACAATATAT TTTTTCATCG ACTGTGAGCA GCATTGAACA
GAACATAAGA CGGACTTTGA ACACAAAGAA CAAACAAAAG GAGATAGAAA GCAGAAATGA
ATCATGCAGT TTCGAACGAT TATTCCTCCT CGTTGTCTCT GTCTACCCCT TTGCGAACAT
CTAGGAGCGA ACACAAACAA ACTCAATCTC GCCATAACCG CACGAATTCG GAACCTCTAG
AATTGACGGC ATCAATTGCC GGTGGAGTAA CAGCTGGATC GAATACCTTC GATACGAGTA
GTACTGCTCC TTCGGCTGCT GTTGCTTCCC CTGCTGCAGC TACTTCTGCC ATCACCGACA
GCAGTGTCGA GGAAGTGGAT CACGAACACA ATGTGCTCGT CAGTAACGAT CGTCGTGATT
TGCTGGATAG AGGTTGGTCG ACGTCGAATC TTACCACAAC CACGACACAA CAGCGACAAG
GGCTCGTTCT GGGACACGCC AGTAGGAGTA GCGGGCGCGC CGTCCGAGGG ACCATTTCTA
TCGACGTCGC ACACTTTCAC GAATCTTGGA CCAATAGCGA CGGTGCCGAT TTCTTAGGCG
CCTCCTTTGC TATTCCCGCG ACCACTGCCT CGCCTTCACC GCCCTTTGGT TCCTCGGCGC
ACGCTGCCGC ATTGCGCAGT CGCAGCTCGG GATGGGGCCT GGCGCTGCAG CCAAGCGTGT
CCGTGGGGCT CGATTTGGGG GGAGGCGAAT CCTCGGGATC CTGGGCGCTA CCAGCCGCGC
CCGAAATGAC GCGGAGGTAT TCTTCGCTTT CACCAAAAGC GAGCACTTCC CTGGCCGATT
TCAACCGCAA TGGTAGTCCT TCCGCGGTAC CATCAACACC GATTGCCGGA CGCTCTGTTT
CGGGGTTCTC GTCCGTCATT CACGATGCTG CACGTATTAC CGATTGGAAT CGGGTTTTGA
CGGCCTGTCA ACGAGATCCG CAGGATGCCG CCTATACGGG AAGGGACGGC TGGACAGCCT
TGCATCACGC TTGCAATCGT CGGTGTCCCT ACCCCGATGT CGTGGAAGCC TTGATTCGGG
CCTATCCGGA GGCCCTATTG AAAGAAGTCG ACAACGGGTG GTTGCCCTTG CATTATGCGT
GTCGCTTCAA GGCGCCACGC GATGTTATCC GTCTACTGCT GAGTTGCTGT GACGAAAAAT
CGCGTGTTTC TGTATCCAAG CGCGATCGGC AAGGGCGAAC ACCCTTGTAC TATGCAGTAC
GCTATGATGC CCCACCAGGA GTGGTGGGAT TGTTGCTACA GGTGGACCCA TCCGCTGTTT
TGGAAGAAGA CCAAAACGAA GACTCGCCGC TCGCTCTCGT TTGGGATTCG TGGGCGGAAA
AGTTGGAAGG CAAGAAAACG CTTCTACCAT TCTTGACGCC AACCGCAATC CAGGGTGATA
CGGAAGAAGA GATGGCGGCA TCGCTGCGCA GCAAACTGAA ACAGCAAACA AAGCTTCATA
AACGCTGGAA GAAGGTGAAC ATGCTGCTGA AAGCGGCGTT CGGATTTGTC GTAGACGAAG
AAGACGAAAT GAATCTCGAC GTAACAAATG CCACTAGTCC TAAAAGTCGC CAGTGGCGTG
TCGTTCACGC GACGGCCGCC GTCAAATGCC ACATCTCACT ATTTCTGTTG GCATGTGCCT
TGTACCCGGA ACAAGCACGA GAACTTGATG AGAGTGATCT AAGGCGTCCC GGGGATAGTA
CTGTCCGGAA TACGAAGCAG ACGGCTTTGC ACTTGGCTGT CTCCTCCAAC GCTTGTGGCG
AAACAAGCAA ACGCGTGATT CATACGTTGC TCAGTCTGAA CCGACAAGCT GCACACATCC
CTGATGGAAT CGACGGTAGT TTACCGCTCC ACAGGATGGT AGAAAACGAA CGCAAACAAG
AATGGGCTGA TCAAATCTTG ATTTTGTATC ATGCGAATCC ACGAGCGGTC CGCGTTGAAG
ACGCTAACGG CAAACTACCA CTACATCGCG CTGCGTCCAA ACTTCCACAC CTCGTCGAAG
AAGACAACGC TGTGGCTACG CAGTCAGTCA TTTTGAACCT AGTGGACAAG TATCCACAGG
CTGCAGCACA TTTGGACCGA TCCGGCTGTT TGCCGTTGCA CATGATCGCA ATGTATGGGG
AATTCTGGGA CGATCAAGTC GAAGCTGTGT ACACCGCCCA CCCCCAGGCT GTGCAAGTGC
GTGCTGGTCC TAGTTGGGAC CGACGTTTGC CTATTCACAT GGCGGCCGCC AATTTGGACT
CGGGAGAGTC TCTCTTGACA CGATTGGTAG AATTGCATCC CCGGGGACCG TCTATGGCGG
ATCGACAAGG AAAACTTCCG TTGCACCTTG CATGCGACTT GGGAAAGGAA TGGGATGCTA
TCAAAGCCAT ATATGATGCC TTTCCTGATG CGTTAGAAAA GGCCGAGGAA AATGCTCGTG
GCTGGTTGCC GCTGCACGTT GTGGCCGCTT GTGCCAATGC GAGCTCAGAC TTACTGCATA
AACTTATCGA GCTGTATTCA GAAGCCGCCT GTGTTTGCGA TCGGAATGGT CGCTTTCCGT
TGCACCTAGC TTGCCTTTCC GCCAAGTCAT GGAAGGGCGG GCTGGAATGT TTGTTTGATG
CAAACCCCGC AGCTGTTGAT ACGAGAGACA AATGTGGGTT GTTACCCTTG CACGTGGCAG
CCTTGCGGAT GTGCACATTG TCTTCAGATA ATGCGACGGA GAGTACTCTG GCTGCAACAA
CGTCAAAGCA CGCTAAGAAT GAAGTGGCTG ATTTGGATAT TCTTTTCGAA TTGTTGCGAG
CCGATCCAAC CACCTTGACG AATTGAAAGT CATGTTTAGT GTTTAAGATC AACAGGACGG
TGTGCATTTC TATTGTGCGT GTTGACTGAA TATGCTTTTC GCTACCGAAG TTAACGGATA
CGATGTATTG ATCATAAATG TGATAGAGAA AGATTTTCCG AGTACTCTAC TAGTAATGTC
AGGTTGCGAT GAGAAATAGG GATTCAATTT CCGTGGCTC
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| Protein sequence | MNHAVSNDYS SSLSLSTPLR TSRSEHKQTQ SRHNRTNSEP LELTASIAGG VTAGSNTFDT
SSTAPSAAVA SPAAATSAIT DSSVEEVDHE HNVLVSNDRR DLLDRGWSTS NLTTTTTQQR
QGLVLGHASR SSGRAVRGTI SIDVAHFHES WTNSDGADFL GASFAIPATT ASPSPPFGSS
AHAAALRSRS SGWGLALQPS VSVGLDLGGG ESSGSWALPA APEMTRRYSS LSPKASTSLA
DFNRNGSPSA VPSTPIAGRS VSGFSSVIHD AARITDWNRV LTACQRDPQD AAYTGRDGWT
ALHHACNRRC PYPDVVEALI RAYPEALLKE VDNGWLPLHY ACRFKAPRDV IRLLLSCCDE
KSRVSVSKRD RQGRTPLYYA VRYDAPPGVV GLLLQVDPSA VLEEDQNEDS PLALVWDSWA
EKLEGKKTLL PFLTPTAIQG DTEEEMAASL RSKLKQQTKL HKRWKKVNML LKAAFGFVVD
EEDEMNLDVT NATSPKSRQW RVVHATAAVK CHISLFLLAC ALYPEQAREL DESDLRRPGD
STVRNTKQTA LHLAVSSNAC GETSKRVIHT LLSLNRQAAH IPDGIDGSLP LHRMVENERK
QEWADQILIL YHANPRAVRV EDANGKLPLH RAASKLPHLV EEDNAVATQS VILNLVDKYP
QAAAHLDRSG CLPLHMIAMY GEFWDDQVEA VYTAHPQAVQ VRAGPSWDRR LPIHMAAANL
DSGESLLTRL VELHPRGPSM ADRQGKLPLH LACDLGKEWD AIKAIYDAFP DALEKAEENA
RGWLPLHVVA ACANASSDLL HKLIELYSEA ACVCDRNGRF PLHLACLSAK SWKGGLECLF
DANPAAVDTR DKCGLLPLHV AALRMCTLSS DNATESTLAA TTSKHAKNEV ADLDILFELL
RADPTTLTN
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