Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_43350 |
Symbol | |
ID | 7197397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011670 |
Strand | - |
Start bp | 198796 |
End bp | 200481 |
Gene Length | 1686 bp |
Protein Length | 348 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002177883 |
Protein GI | 219112263 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATTTACGAAT GCTCAAGGCC TATTACGAAG GTCTAGTGAC TCTTGCCGTA AACTATTTAC AGACAATCCA CACTCGACAC CAGGCAGAAA TGGACAAGCG AACTACTCGG TCGGACGATC CAAGCTTCAC AAAAACTCCG AATCAGGCCT TTTCCAAATC AACCTCTTCA AGCCGTTCGA CCGCTACGGT GCTCGGCGAG ACTTCCCGAA GGTCGAAAGC ACTGCAGTCT TGCCCTACTT ACTAATGTGA AGCAAGCAAA GTCAAACCCA CACGTTCTTC ACAGAGCAAC ACACAATCCG AAGAGGTTCC ATACTTGTTC GCGTTTTATT TTCCGAACGC TTTTTGCACC AACCAATATC GACTTCGGTC TCCCAAACGC CAAAGAAGTC GCAACCGCAC ATTATTAGAC TCGACCCTTT CTCCCACTGT CAATACAAAC CTTTACACTC ATTTCTCTCA TGTCGTTGAA AGCTTTACTG GGAGGTGCCA TGATCGGCAG TGCTTCTGGA GTACTTCTAC TACTTACCGG AAATATTATG GGAGCTTCTG GTATCGCATC GTCGGCTCTC CTCAAACCTA CACAATTGCT CACCGACCAA TCTCAACACT GGAAGCTCGT CTTCCTTGCA AGTTTTCTGC TTACAACTAA TGTCTTCTTT TCGGTCCCTT TCGACCGTTC AGATCCGGCG GCTGCTACCT TATCTCCACT GGGGTACGGC TTGGCGGGAT TATTTGTGGG CTTTGGCACC AAACTCAGCA ACGGGTGCAC GAGCGGGCAC GGCATTTGCG GTTTGGCCCG ACTCAGCAAG CGATCAATGG CAGCCGTTGC AACATTCATG GCCTCGGCAG TTGCCACTAC CTACCTGACG CAAGTATCTC CCTTGCTCAC AAAGTTCACT AGCGTGCTGC AAGTAGAAGC GGCGCAGCAG ACGCATTCGC AGCCTCTCCT CGGTGTGGCG TCCGCTCTCA CACTCTTGTC TGTCGTCGCT TCAGCCGTGG CGCCATGGTT TCGGCAAAAA AAGGACGAAA ACGGCCAGGC CCGCATTCTG CCAGCCATCG CCTCTGGGTC TATGTTTGCC TCTGGTCTGT ACATCGGCCA AATGGTATAC CAGTCGAGGG TGCTTGGATT TTTGAATCTT GCCGGTATGA CTGATGGATC CTGGGACCCA ACACTTGTCT TTGTCATGGG TGGTGGGGTG ATGGTTAGCC TACTTAGCTA CCAGTTCTTG GAGGGGTATC GCATAACGCG AAGTACTACT CCCGTCAAGC ATCCGTTGGC ACTCAAACCT GATGCTCCGT TTTGCATCCC CACCAACACC CATATTGACG CTCAGTTGAT ACTCGGATCG GTGGCATTCG GTATTGGTTG GGGCTTAGGC GGTATTTGTC CCGGACCCGG TATATTTCTC GCAGGGGCTG GGGTCCAGAA TGTTATTCTG CACTGGTGGC CGTCCTACTT CGTAGGAACC TATATCGCCA ACGAAATTCA GAATCAACAA TCCTAGGCCC GAAAAGAAGT GCCAATACCA CCCATTGAAA TTTTCCGAGG CAAATATGGC CAAGCAAGTT GAGTCTGGAG GGTGAATATA GAAATGGGCG ATACACTGAG TAGCCACTCG CCATGGCAGC TCGCCGAATT GAATTTACAT TAATCCCTTT CACAGTAAGC TGTTTCTTTA CAAGAC
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Protein sequence | MSLKALLGGA MIGSASGVLL LLTGNIMGAS GIASSALLKP TQLLTDQSQH WKLVFLASFL LTTNVFFSVP FDRSDPAAAT LSPLGYGLAG LFVGFGTKLS NGCTSGHGIC GLARLSKRSM AAVATFMASA VATTYLTQVS PLLTKFTSVL QVEAAQQTHS QPLLGVASAL TLLSVVASAV APWFRQKKDE NGQARILPAI ASGSMFASGL YIGQMVYQSR VLGFLNLAGM TDGSWDPTLV FVMGGGVMVS LLSYQFLEGY RITRSTTPVK HPLALKPDAP FCIPTNTHID AQLILGSVAF GIGWGLGGIC PGPGIFLAGA GVQNVILHWW PSYFVGTYIA NEIQNQQS
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