Gene PHATRDRAFT_42978 details

Gene Information

• Locus tag: PHATRDRAFT_42978
• ID: 7196211
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1679846
• End bp: 1682084
• Gene Length: 2239 bp
• Protein Length: 632 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002177347
• Protein GI: 219111191

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCTATCCCCA TTTTGTCAGT CAACGAGAAA GATACGATAG TCAAATACAG TGCACTCGAG 
CTAGTGACTG ACTGACGAAC TGCGAAGGTT CGTCGAACGA AGCGCCTAAC TTTGGAATTG 
TTTGACTGTG AGATTCTGCT GGTTTGCGGA TTTGGTTCCA TTTCGGCCCC CCGCAAGACT 
CTGAGTCTCT CAATCCCACC AGCCGTTTAA TCAGTTGGGT CCTTTGGCTG CGATAACATT 
ACGTAACTAG AGCCGGAAAG CAGTATCATC ATGGATAGGA TGCGCTGGAC CGAACAGTCC 
GCCAGTCGAG TGGGCTGTCC AACTATAAAA AACCATTCGG TCACCCACTT TGGCGATTAT 
CTGTTTTGCT TTGGTGGCTA CGACGGCCGT CGCAACCACA TGACCTTACT GATTTATAGC 
ATTCTAGAGC AACGCTGGTT TCGTCCTCAC CACGCGATGG GAACGGAAGG ACAGGGCTCT 
AATTTTCTCG GCGATCCCAG TTTTCTAGTC CAGGGCACCC CACCTCCGGG GCGGAACGGA 
CACTCCGCCA CGCTGGCCGC GGATCCCGAC GACGAAGAGA ATGGGCGAGT TATCATCATT 
GGTGGATGGC TAGGGACAGG GCCGCTAGCC GCTTCCGACA TGCATGTTCT AGATATTAGT 
GGCGCTGGCA GACAATTGCG ATGGTACCAG CCTCCCATCA AAGGAACGCC GCCCGGACCT 
TGCAATATGC ATTCCGCAGA TTACGTGTCT GCGTTAAAAG AAGTTTTTGT CTTCAGAGGC 
GGGAACGGAC GGGAATATTT GAATGACTTG CATGCCTTGC ATGTGGAAAC CTTGACCTGG 
AGACGAGTTG AAACGACGGG GGCGATTCCT CAGCAACGCG CTAACCATTC GTCGGCCTTT 
CTGGAAGAAA CGCAGGAGTT GTTCGTTTTC GGTGGCTGGA ACGGTACAGA GCGTTTGAAT 
GACATTCACA TACTTGACAC GGCCACGAAT ACATGGACCT GTCCGCGAGT TGGTGGTGTA 
CTACCTCATC CTCGTGCAGG TATGACTTTG ACGGCACTGC GTGGACGGCT GTACTTGTTT 
GGTGGTAGCG GTACGTCCGC CAAGTGCTTC CAGGATTTGC AAATTCTAGA CCGTCAGACA 
ATGGCTTGGC TAGATGTCAC CCAGTACGAG ACTGGCCGCA ACGGCCACCA CGATTCAGAA 
CACGAGACTA CGGGAACATT TCGCTTCGGT GGAAGTCACA CACTAGACGA TGGTCAATCT 
CATATGTACG GTCATCTCGA AGAGACTCCC CGTTTCACCT TCGGAGGTGC TCAGCAAGAT 
AACAGCCTAG ATGCCAATCA AGAGGCCGTC GCCCGCCCAC CTCAGCAAGG AGGGGGACAG 
GACGGTGCAT CGCTTTCGTT AGGTTCCTTT ACGAGTAGCC GCGCTGATTG GCACGCTCGT 
GATATGGCGG CTCGACATCG TCAACCGGCA TTGCCCAACG TTTCTCCGAA TCCCAATGAC 
GAGGACTCGG TACCCGCGGT ATTGATCGAC GGTACGGGAC CTGGGAGGCG TGCTGGTCAC 
ACGGCGACGG CGGTGCATCG CAAAATATTT GTTTTTGGTG GCTCGTGCGG ATCTGATTAT 
TTGAACGATT TCTTTGTTCT CGATACAGAC CCTCCCCCGC ATGCGCTGGT ATCAGAGCCT 
ACCAGCGTTC AACTCTTCGA ACGTCGTTTG CGGCACTTTT TTAACGATGA AGAATTTTCG 
GACGTCACTT TCGTCGTTCA GGGGGAGAAG GTTTACGGTC ATAAAATGGT ATTGTCCATT 
GTTTCGGATT GTTTCCGTGC CATGTTCACA ACCGGGTTTC GCGAGTCGGA AGCGATGGAG 
ATCGAAATAC CTGATTGCAG CCACGCGTCG TTCTTATCCG TGATGGAGTA CGTCTACACG 
GGAGCCTTAC CAAAAATGGA TATGGCCAAT CAAGATCGGG ATCGGAGCTT GACTCGCGTG 
GTCGAAATGC TGGAGCTATC CGACCGATTC TTTTTAGACC ATCTGAAACA AATATGTGAG 
AGCATCTTGC AGCCGGCGGT GACCCACGAT ACGGCAGAAT ATCTTTTGGG GATCGCTCAG 
AAAACGAATG CGAGTCAATT GCAGTCCATT TGCGAGCACT TTGTGCGCAA CCGCAACGAG 
ATTGCGTAGT AGACTATTTC GCGCGCGATG GAGCTTTGGT GTAGAGTTGT AAGATAGGTG 
CGTTGTTACT ATTAGTACG 

 

Protein sequence

MDRMRWTEQS ASRVGCPTIK NHSVTHFGDY LFCFGGYDGR RNHMTLLIYS ILEQRWFRPH 
HAMGTEGQGS NFLGDPSFLV QGTPPPGRNG HSATLAADPD DEENGRVIII GGWLGTGPLA 
ASDMHVLDIS GAGRQLRWYQ PPIKGTPPGP CNMHSADYVS ALKEVFVFRG GNGREYLNDL 
HALHVETLTW RRVETTGAIP QQRANHSSAF LEETQELFVF GGWNGTERLN DIHILDTATN 
TWTCPRVGGV LPHPRAGMTL TALRGRLYLF GGSGTSAKCF QDLQILDRQT MAWLDVTQYE 
TGRNGHHDSE HETTGTFRFG GSHTLDDGQS HMYGHLEETP RFTFGGAQQD NSLDANQEAV 
ARPPQQGGGQ DGASLSLGSF TSSRADWHAR DMAARHRQPA LPNVSPNPND EDSVPAVLID 
GTGPGRRAGH TATAVHRKIF VFGGSCGSDY LNDFFVLDTD PPPHALVSEP TSVQLFERRL 
RHFFNDEEFS DVTFVVQGEK VYGHKMVLSI VSDCFRAMFT TGFRESEAME IEIPDCSHAS 
FLSVMEYVYT GALPKMDMAN QDRDRSLTRV VEMLELSDRF FLDHLKQICE SILQPAVTHD 
TAEYLLGIAQ KTNASQLQSI CEHFVRNRNE IA