Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_42959 |
Symbol | |
ID | 7196201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011669 |
Strand | + |
Start bp | 1631772 |
End bp | 1632997 |
Gene Length | 1226 bp |
Protein Length | 403 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002176823 |
Protein GI | 219110143 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTGAAAGTA GAGAATGAGG TCACCCCTTC ACGAAACAAA ATCTCAGGGT GAGGATGCTG CTTCTGGTCA GCACATTCTC TCACAAGAAA AGTTGAGAGT ATTTGCTTCC TCGCTGGAAC CTTGGGTACA ATCTTGTCGT TGCATTCCGT GTGAAACGGA TGAAGTATGT TTCTCGTATC GTTGCCGATG CAGCTTCCAG ATCGTCCATG GTGACATGAA AAGCGACGGC CACTTGCGTT ACGCGGTCCG ACAGAACCAC GAGCCAGTAT GCATCACTGC GTTCCCAGTG GCAAATCTGA GAATACAAAG GTCAATGTGG AATGTACTGG CACTCTTCAA CGACCCGGAA GAACAGTTCG GCCAACTAAA ACAGTCACTA ACGAGTGCTA CGTTTTCAAC ATCGTGGGAC GAAACAATGT GTGTGGTAAC CTTGCACTAT ATGAATCCTG TCAGTGATGA GAGTGCTTGG GAGACGGAAG CACAGAATAT GTGCCAACGG CTTGAGTTAG CCCAACTGAC AGGTCGTTCC CGAAAACGCA TTCTACGGAC AAGGAATGAG GGGACTACCA TAATTTGCGA CACAATTTGG ATGGAACGCG TGGGATCAAA CTGGAATGTC AGCCTTGAAA AAACTTTGAC ATCCAGCGAT CGTATAGCAG TCCACTATAA CAAGCCTGAA GATGCATTTT ACCACCCTAA TTCTCGAGCG ATGTGTAATG CATTAGAATG GATGCTTTCG CGGATTGTCT TGATCGTAGC GGATCTCGAA ACGTTAACTC CGCGCTTGTT GGAAATGTAT TGTGGTTGCG GGGCTCATAC TATACCTTTG GCGAAAACTG GACTATTGTC GAAAATATTG GCGATCGAGC TAGACGAGAG ACTGGTACGC GCTTGCCAAC AGAACATCCT TTTGAACGGC ATCGACTCAG AGCTGATCGA CATGGTATCT CAGGACGCGG GAAAATGGTC CCAACGTTGC GAAAGTAGCT TTGACATTAT ATTAGTCGAT CCACCCCGGC AAGGTTTGGA TGAATCTGTT TGTCAAATGG CGACTCGGGG TGACTTTCAG CATATGCTAT ACATTTCCTG TGGTCGAGAT GCATTGGTGC GAGACTTGGA ACGACTCGGC GGCAGTTTTG CAGTGGAGAA TTGCACTCTT CTCGATCTCT TTCCGACCAC TGGCGCAGTC GAAAGCTTAG TACATCTGAA ACGAAAGATC CGATAA
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Protein sequence | MRSPLHETKS QGEDAASGQH ILSQEKLRVF ASSLEPWVQS CRCIPCETDE VCFSYRCRCS FQIVHGDMKS DGHLRYAVRQ NHEPVCITAF PVANLRIQRS MWNVLALFND PEEQFGQLKQ SLTSATFSTS WDETMCVVTL HYMNPVSDES AWETEAQNMC QRLELAQLTG RSRKRILRTR NEGTTIICDT IWMERVGSNW NVSLEKTLTS SDRIAVHYNK PEDAFYHPNS RAMCNALEWM LSRIVLIVAD LETLTPRLLE MYCGCGAHTI PLAKTGLLSK ILAIELDERL VRACQQNILL NGIDSELIDM VSQDAGKWSQ RCESSFDIIL VDPPRQGLDE SVCQMATRGD FQHMLYISCG RDALVRDLER LGGSFAVENC TLLDLFPTTG AVESLVHLKR KIR
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