Gene PHATRDRAFT_42959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_42959 
Symbol 
ID7196201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011669 
Strand
Start bp1631772 
End bp1632997 
Gene Length1226 bp 
Protein Length403 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002176823 
Protein GI219110143 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTGAAAGTA GAGAATGAGG TCACCCCTTC ACGAAACAAA ATCTCAGGGT GAGGATGCTG 
CTTCTGGTCA GCACATTCTC TCACAAGAAA AGTTGAGAGT ATTTGCTTCC TCGCTGGAAC
CTTGGGTACA ATCTTGTCGT TGCATTCCGT GTGAAACGGA TGAAGTATGT TTCTCGTATC
GTTGCCGATG CAGCTTCCAG ATCGTCCATG GTGACATGAA AAGCGACGGC CACTTGCGTT
ACGCGGTCCG ACAGAACCAC GAGCCAGTAT GCATCACTGC GTTCCCAGTG GCAAATCTGA
GAATACAAAG GTCAATGTGG AATGTACTGG CACTCTTCAA CGACCCGGAA GAACAGTTCG
GCCAACTAAA ACAGTCACTA ACGAGTGCTA CGTTTTCAAC ATCGTGGGAC GAAACAATGT
GTGTGGTAAC CTTGCACTAT ATGAATCCTG TCAGTGATGA GAGTGCTTGG GAGACGGAAG
CACAGAATAT GTGCCAACGG CTTGAGTTAG CCCAACTGAC AGGTCGTTCC CGAAAACGCA
TTCTACGGAC AAGGAATGAG GGGACTACCA TAATTTGCGA CACAATTTGG ATGGAACGCG
TGGGATCAAA CTGGAATGTC AGCCTTGAAA AAACTTTGAC ATCCAGCGAT CGTATAGCAG
TCCACTATAA CAAGCCTGAA GATGCATTTT ACCACCCTAA TTCTCGAGCG ATGTGTAATG
CATTAGAATG GATGCTTTCG CGGATTGTCT TGATCGTAGC GGATCTCGAA ACGTTAACTC
CGCGCTTGTT GGAAATGTAT TGTGGTTGCG GGGCTCATAC TATACCTTTG GCGAAAACTG
GACTATTGTC GAAAATATTG GCGATCGAGC TAGACGAGAG ACTGGTACGC GCTTGCCAAC
AGAACATCCT TTTGAACGGC ATCGACTCAG AGCTGATCGA CATGGTATCT CAGGACGCGG
GAAAATGGTC CCAACGTTGC GAAAGTAGCT TTGACATTAT ATTAGTCGAT CCACCCCGGC
AAGGTTTGGA TGAATCTGTT TGTCAAATGG CGACTCGGGG TGACTTTCAG CATATGCTAT
ACATTTCCTG TGGTCGAGAT GCATTGGTGC GAGACTTGGA ACGACTCGGC GGCAGTTTTG
CAGTGGAGAA TTGCACTCTT CTCGATCTCT TTCCGACCAC TGGCGCAGTC GAAAGCTTAG
TACATCTGAA ACGAAAGATC CGATAA
 
Protein sequence
MRSPLHETKS QGEDAASGQH ILSQEKLRVF ASSLEPWVQS CRCIPCETDE VCFSYRCRCS 
FQIVHGDMKS DGHLRYAVRQ NHEPVCITAF PVANLRIQRS MWNVLALFND PEEQFGQLKQ
SLTSATFSTS WDETMCVVTL HYMNPVSDES AWETEAQNMC QRLELAQLTG RSRKRILRTR
NEGTTIICDT IWMERVGSNW NVSLEKTLTS SDRIAVHYNK PEDAFYHPNS RAMCNALEWM
LSRIVLIVAD LETLTPRLLE MYCGCGAHTI PLAKTGLLSK ILAIELDERL VRACQQNILL
NGIDSELIDM VSQDAGKWSQ RCESSFDIIL VDPPRQGLDE SVCQMATRGD FQHMLYISCG
RDALVRDLER LGGSFAVENC TLLDLFPTTG AVESLVHLKR KIR