| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42841 |
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| Symbol | |
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| ID | 7196438 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 1286304 |
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| End bp | 1289597 |
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| Gene Length | 3294 bp |
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| Protein Length | 915 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177259 |
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| Protein GI | 219111015 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGAT TCAGTTTAAC AAATGTAAAC TCCGATGAAG AAGAAAGTAA GTCTAGGGAT
TTCGAGTCTA CGGTACTAGC TTTAAATGGT GTGGACGTCG AACTCGAGTA CAGCAGCGAC
GACGACGATG AAGAAGACGA GCCTCCGCAT CCACTGGGGT TTCGGTCGAG CACTCGGATT
TCTCTCCATA GTCCGACAGA AACAATGGAG CAATACAAAC GTAGGTGGGG TTACTTCTAC
CCGATAGACG ATGCCCATGA CGAGAACTTC TTTGACACCC CAATAGATTC CAAAATCCAA
TCCTTTCCAC CGTTATCGAC CTATATGAAC CCCAACACAG TATCCACGAG AGCCCTTATT
GGCTACGCGA ATGAAAGGAA ACCAACAGAT GACTGTGTGG ATCAAGTAAT TCAGCTGCTG
CAGGCCGCCG CTTTGGTTGA CGAACGAGAC TTGACGACAC CGCTTTTGCT GGCTACCAAT
ACACATCTCG ATGCCACCAA TCGGTTAACG CAACAGAAAT TGATCGAAAT TCAGCATGAA
ATTGACGTAG AACGCAGGCG GATGGAGCGT GACCATTTGG AAGCAGCCGA AGCCCTTCAA
TTGATTCTGC ATCGAAACCA AGAAACGGCT GAATTGATAA GTGCGGAACA ACGTCGGCTC
GACAGCGTCG CACAAGAAGG AGAGGATATC CGAGCTCGAG CGGACAAAGA AAAACAAACA
GCGTTGAAAG ATGAAGAGCG ACAGAAAGAA AAGGACGCTC AGGAAAATGC CAAGCGAGAG
AATCTAGATT CTCAGAGGGC TGCGGAAAAA GAAGAGGCTG TAAGATCCTC GAAGTATGAA
TTTATCGCCA AAGCCAAGAA GCTTGTTGCG CAGCTTGTGC TAATTCGGGC TTCAGTAGAA
TCATTCGAAA AATCAAAAGC TGTTGGAAAG CGTCGATTAC AAATGAAGAA AATAGTCAAC
GGCAAGGTCA ACACTCTTTC TGAAAACACG CAAAAGATAA GAGAGGTCGC AAATAATGTA
TCACAAGCTA TTGAAAAAGC GCGCGACGAA GACAAACAAG CCAAGGAGCA GGGCGAGGAG
GGGAACAAAG GCTTCCTCCC AGAAATGGCT AGAGGAAAAC GATACTTTGT TGATTTGCTC
TCAAGCAAAG TCATTGTCCG GGTCCAAGCC GAAGGCTTCA ACGGGTGAGT TTAGCATCTA
TCAATGGACA CTTATTTGTG TGCATGCATA CACTCACATA TTTTTACTAG TCAACGCGGT
GATGGATTCC CTCTTGCAAA TATGTTGGCT CAGGTTTCCA CTGATCACAA AGAACTCGGT
CCAAATCTTG CTGCCCATAT ATACACCGTC TGCCCCACAG CTATACCGAG CTTGCCGGAT
CCTGCACCAG ATGCAAGCGA GGATGATCTG ATGCGAAGCC TTGGCATGTT GCAACACGCG
GATGGCAACT TTGAAAGCTT TGAGCGCTTT TTGGGCAGAA CTGAGGTAGG TGCTGCTGCG
TCAACAACAA TTTCTTCAAT TTTTGTCGAA GAAGTGATCG AGATGCTGTA TGCACATGCC
TAACATATTT CTCATAACAG GGCATAATTT CAATGGTGGC AAACATCATG TCTTCAAGTC
CTGCAAATCA TACGCTGCTT GGCGGCCATG AAGGGGCAGT CAAGTGGATG ACGCGATTTC
TTTCCTTGCT ACCAAGCAGT ACCGACACAG CCCTCCCATT GATCGTTGCA CCTGTTCTGG
ATGCATTTCT TACAGGTGCA GGTCACATGC TCGCAAATAT CCACGCTGAA GAATTCAAGC
TCCTATTGAA AGCTATCGAC GAGAACGTCT TGCCTAGATT GGATGACGGG CCCACTGGGA
AGCCTTCCGC TATGCGGTTA GAGAAGACTA TGAGTGGAGG ATACGAAAAG TTTCAAAGTA
CACTTCCATC TCGTGCTTTG GCGGAGTTTT ACAATGGATC AAGCTTCTTG CGAAGTCACG
GTAGCACATC AACACCCTCA CCTTTCGGTC ATTCGGTGTT TGCCGGAAAT GCGGGGACTA
CGGGCGTCCC CCCTTTCGGC CAAAGCTCAA CGAATGTAAG TTCTGGCCCT AGTTTTGGGG
GACCTAGCAT TACTGCGAAG AAACAATCAC CTTTTGGTCA GAGCTTGGTA GAAGCGGGAA
CAAGCTCGGA TGCATTTGGA AAGCCACCTT TGAATGCATC CCCTTTTACT GGTAGTGGGA
CAACATCTCA TACTACATCA GGTATCTCAA AAATGGACCA GTCTGATTCA TTCCAGCCAA
AACAGACGCA AGCATTGCCG TTTGGCGTAG CTTCAAACAC TTCAACTTTT GGACAGGTTG
CTTCTTCGTC GCCAGCTCTA CTTCAAAAGT CATCCCCCTT TGGAAACACT TTTCCAAGTC
CGTCCCCGTT TGGAACTGCT GCCTCCGTCC CCTTTGGAAA GCCGAACGCA GTCCCTTTAT
CCGTGAGTGC ACCCAATCCA AGTACTTCTC CGTTTGGAAA TTCTTTACAA ACCGTTGTGC
CCTTTGGTGG CCAAAACATG AGCCTTCCTT CGTCTGGTTC TTCTATTCCA AACACTTTTC
CATTCGGAAA TCCCGCACAA GCCGCTTCGC CGTTTGGAAA GCCAACCCCA ATGCTTTCGT
CATATGGTAT TTCCCATCCA AATCCTTCGC CATTTAAAAA TCCATCAAGT GGCTCGTCTC
CATTTGGCTC GGTTGTTGCT AGCTCATCTC CGTTTGGAGG GACCAGCAAG GTAATTTCCA
CATTCAATAG TGGCTCGTCT TCTCCGTTTG GCAGCCAAAC GGGTTCTTCG TCTCCTTTTC
CATCAGTTGG AGATTTTCCA CCAAATTCTA ATGGAAGACC CAGCCACACA ACCAAAACGC
AGCCTTGTAA ATTTTTTGCC GAAGGTCGCT GCCGCTTCGG AGACAATTGC AGGTTCTCGC
ACGAACCTCC TAACAGTACC AGAATTCCAT CATCTAGTCC CTTTATGAAC ACAACATTTC
GTCAATGACC AACATCCGCA CACAAATCTG GGTTGATAGC AATGCTTTAT CCTCGGTCTA
TCGATAAGAT TTGGATCGCA AGTGCCGTGG GGGAGCCCCA GTTCGCTTTG GGCAGTCTCT
GATGAAGGGC TTGGAGACAG TAAGTTTTCA TTAGATGGTA TGAGACATGA GAAGCTGTTC
GAATTGTGAA CACGTTTAAA ATCGTCTAGC ACTTCGAATT AAAAGACAAG GCTGTTCTTA
CTAATGGTAG CATCTTCGAG CTAAAAGATA CAATTAAGAT TATCGACTAT CTAG
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| Protein sequence | MARFSLTNVN SDEEETLNGV DVELEYSSDD DDEEDEPPHP LGFRSSTRIS LHSPTETMEQ
YKRRWGYFYP IDDAHDENFF DTPIDSKIQS FPPLSTYMNP NTVSTRALIG YANERKPTDD
CVDQVIQLLQ AAALVDERDL TTPLLLATNT HLDATNRLTQ QKLIEIQHEI DVERRRMERD
HLEAAEALQL ILHRNQETAE LISAEQRRLD SVAQEGEDIR ARADKEKQTA LKDEERQKEK
DAQENAKREN LDSQRAAEKE EAVRSSKYEF IAKAKKLVAQ LVLIRASVES FEKSKAVGKR
RLQMKKIVNG KVNTLSENTQ KIREVANNVS QAIEKARDED KQAKEQGEEG NKGFLPEMAR
GKRYFVDLLS SKVIVRVQAE GFNGQRGDGF PLANMLAQVS TDHKELGPNL AAHIYTVCPT
AIPSLPDPAP DASEDDLMRS LGMLQHADGN FESFERFLGR TEGIISMVAN IMSSSPANHT
LLGGHEGAVK WMTRFLSLLP SSTDTALPLI VAPVLDAFLT GAGHMLANIH AEEFKLLLKA
IDENVLPRLD DGPTGKPSAM RLEKTMSGGY EKFQSTLPSR ALAEFYNGSS FLRSHGSTST
PSPFGHSVFA GNAGTTGVPP FGQSSTNSLV EAGTSSDAFG KPPLNASPFT GSGTTSHTTS
GISKMDQSDS FQPKQTQALP FGVASNTSTF GQVASSSPAL LQKSSPFGNT FPSPSPFGTA
ASVPFGKPNA VPLSVSAPNP STSPFGNSLQ TVVPFGGQNM SLPSSGSSIP NTFPFGNPAQ
AASPFGKPTP MLSSYGISHP NPSPFKNPSS GSSPFGSVVA SSSPFGGTSK VISTFNSGSS
SPFGSQTGSS SPFPSVGDFP PNSNGRPSHT TKTQPCKFFA EGRCRFGDNC RFSHEPPNST
RIPSSSPFMN TTFRQ
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