Gene PHATRDRAFT_42768 details

Gene Information

• Locus tag: PHATRDRAFT_42768
• ID: 7196394
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011669
• Strand: -
• Start bp: 1053398
• End bp: 1055457
• Gene Length: 2060 bp
• Protein Length: 599 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002177211
• Protein GI: 219110919

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGAGCGTTTG ACAAAAAGTG TGAATGCACC TTGGCATTCC TGATCGATTT ACATCATTGG 
AAGGCTACTA GAATTGAGAA AGGGATCGCG TCATTATGAC AGGAGAACAT AAGCGAAAAG 
GATTGCTTCC TTTCGTTATT TATTCTCAAG TCCTTCTTGT AGCCACAGCT TTTGTCCGAC 
CTAATGTGCT GGCTGGACGC TTCCCCCCCT CGACTTCATT GATATCTCTG CCATCTCAAG 
CAAATGTTGA TCGCGGCTCA AACATTTCAG CCACCAATCA AAACGAGGAG ATTCTAGTAA 
AAAACAACAA GTACATCGAG GGTCTACTTG AAAACTTGAC TAGCCTGTTG GATCGCTGGA 
TCATTACGGG ATCTCCGAAG CTTCAAACCA GAATCGGCAA CGTGCTGAAC ATAATTGAAG 
CCGAAGCAAA AGAACCAGAG CTGATAAAAA AAGCCCAGCG AAATATTCAG CGAGCGGGAT 
TGTCTTTGGA ACGTAGACAG CCCGAGAAAT CTACGGTGGA CCTCGGAAAG ACAGACGAAG 
AGAAGCGGCG CACGGAGGCT GAACAGCGGC GACAATGGGA AGCAGATAGA AGATCTAAAG 
CGGTTGTCGA CCAACACTCT AGCCGCTCGG TATTGAGCAG TAGAACCACC CCGAGCCCAA 
CCGGCGAAAA TTTTATGAAA CAAGTGGATT CCAGTTTGTA TCCTCAAAAC TTTGCAAGGG 
AGAAAATCGA ACTCCAGAAG TCCCTTGAAG GAGACAACGT AGACAACCAG ACGGAGACTC 
TAGCAAATGA CCCTGGAAAA TCTGCATCGG CAAAGGTTTC AGAGTTGGTA GCTCTAGCTG 
GGGCTGGATC ATCTTTTGAA GGGCAAAATC TAGGGATTGG AGGGCTGGAT GATGTCCTTG 
CAGAAGTCAA GCGACGGGTA TGGACTCCTT TGGCCGCACC GCCACTTCTC TTACAGGAGC 
TTGGCATTCA GCCTGTTCGT GGACTACTGT TGTACGGTAA GCCGGGGTGT GGAAAAACTT 
TGCTTGCGCG GAAGCTGGGT CAAATGCTTT CGCCATTGCG TCCGATTACG GTGGTTTCCG 
GTCCAGAAGG TAAGTTCATG ATTTTGGCAC GCCATTTCCT GACAAAGATC AGAACTTATC 
GTTTGGCTCT CTTGCTCACT TACATTAGTC ATGGACAAGT TTGTTGGCAG CAGCGAGAAG 
AATCTTCGGG AGGTTTTCGA TAATCCTCCG GACATATATG ACTACTTTCG TATTAGGGAA 
AGCGACGGAG GAGAATCAGT TGAGCGAGCC GCTCTTCACG TCATCGTCAT GGACGAATTC 
GATGCCATCG CTCGATCCAG GGGAGGCCGT GGTGGCTCTG GAGATCAAGG TGATGCTGGG 
GTCGCCCGCG ATAGTGTGGT CAACCAATTA CTGTAAGTTT TGATCGCCTT ACTTCCTGCT 
GGGCAGCTGG CTTTTTGCCT TGTAAACAAT CACACTAATT CTTAATTGTC TGTGGCAGTG 
CTAAAATGGA CGGAGTAGAC ACCCTGTGTG TTCCCACACT TGTTATTGGG CTTACCAACA 
AGCGAAGTCT TATTGATCCT GCTCTTTTAC GACCTGGTCG TTTTGAAGTG CAAATCGAGG 
TGCCACCGCC ACGGACGGTC GATCAGCGTG TGAGTATTTT GCAAGTGCAC ACGCGGAGTA 
TGCACGAAGC AGGCCGGCTC TTGGTACGCG ATGCCCCCAT CGGTTCCGCA GCGGCTAGGC 
AAGCCACTAT AGACCTACCG TCCTATGACG AACTCCTCCA AATGTTAGCA GCTGAGTGCG 
ACGGCTTTTC TGGAGCGTCG TTGGCCGGGG TCTCCCGAGC GGCAGCGAGC CATTCGTTGG 
AGCGTGCGAT AGAGGTGTTT GCATCACATG CCCGCAGTGG CTCTTTGCTC GAAGCGTGTG 
TTGTAACTCG AGAAGACTTT TCGAGTGCAA TCAATGATGT ACTAAATAGT GTGGGGACTG 
ATGACTTTAA GGAAGAGGCG TCTGCTGATA CAGAAGACGA CACAAATGAC AACGACCCAG 
ATACAGACGA GGCAGATTAA 

 

Protein sequence

MTGEHKRKGL LPFVIYSQVL LVATAFVRPN VLAGRFPPST SLISLPSQAN VDRGSNISAT 
NQNEEILVKN NKYIEGLLEN LTSLLDRWII TGSPKLQTRI GNVLNIIEAE AKEPELIKKA 
QRNIQRAGLS LERRQPEKST VDLGKTDEEK RRTEAEQRRQ WEADRRSKAV VDQHSSRSVL 
SSRTTPSPTG ENFMKQVDSS LYPQNFAREK IELQKSLEGD NVDNQTETLA NDPGKSASAK 
VSELVALAGA GSSFEGQNLG IGGLDDVLAE VKRRVWTPLA APPLLLQELG IQPVRGLLLY 
GKPGCGKTLL ARKLGQMLSP LRPITVVSGP EVMDKFVGSS EKNLREVFDN PPDIYDYFRI 
RESDGGESVE RAALHVIVMD EFDAIARSRG GRGGSGDQGD AGVARDSVVN QLLAKMDGVD 
TLCVPTLVIG LTNKRSLIDP ALLRPGRFEV QIEVPPPRTV DQRVSILQVH TRSMHEAGRL 
LVRDAPIGSA AARQATIDLP SYDELLQMLA AECDGFSGAS LAGVSRAAAS HSLERAIEVF 
ASHARSGSLL EACVVTREDF SSAINDVLNS VGTDDFKEEA SADTEDDTND NDPDTDEAD