| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42556 |
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| Symbol | |
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| ID | 7196260 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011669 |
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| Strand | - |
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| Start bp | 409983 |
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| End bp | 412960 |
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| Gene Length | 2978 bp |
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| Protein Length | 964 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002177084 |
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| Protein GI | 219110665 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.162025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACTTAC CGGAGCGCAA CAAAGAAGAG ACGGAGCGGA CGCCGCTCGT GTCGAGTCGG
AACACAGTGG CCAGCGGTAC TACTCCCCGA TCGAACGTTC CCCAACACGG CCGATCGCGG
TCCAACTCAT TTCGCGAACA TCACGGTGTC ATGCCTCCGA TTGCATCGAA TTACCCGTTG
CCACAGAACA AACACCGAGT AACGGCTTCC CTGAATGCGG AAGGATTCGC CCCGAGAGCG
GTACCGTCTT ATACGCCCGG AGTTCCCGTC ACCAACGCCA GTTCTTCCGC CTATACGCTG
GGACGTCAAC CCAGTCTTCC ACTACCCCCG CGCCAACGAC GTCAACCCAG CCAGGATTCT
ACCAATGGAC CCAAAAAGGG AGGTTTCTTT TACTACATTG TCTACGCCAT GGTCAACGTC
ATTATCAGTG TCCCGGGTTT GTATGGCTAC GCCGCCGTCA TTTTCAATCA CGAAGCCTAT
AATGATCATA TGAATGCTCT CAGCAAATTG GTAATATTTT CTTCGCTCAT GCATCAGCTG
GGATTTTGCT TGTTCTCGTC CCTGCCGTTT GCGATCGGTA CCGTACAAGA CGCCGGGCTC
ATCTTTCTCA GTGCCATGAG CAACATCGTG GCCAAAGAAA TTCTGGCAAA CGGGGGAACA
GTGGAGGAAG TTGTGTCCAC GACCTTGGTT ATTCTGGCAA TGAGCACAGC ATGTCTAGGA
CTCGCTCTGG TGGCCATGGG CAAATTCCGA TTGGCCGATA TTGTTTCCTA CTTGCCCATG
CCCGTCGTAG GGGGCTATTT GGCCTTTATA GGCTATTTTT GCCTCCAAGC CGGGGTTGCC
TTGTGTATTT CGGAACCCAT GGTCGGGCTG GCGGATTGGC GATATTTATT GGAGTCGCAA
AATGTGCTTC TGGCTGCACC TGGGCTGGGT GCGGGGCTAG CGCTGACGTA CATTTCTCGC
AAGGCCGAAA GCGATGCCGC CTTGCCAGCG GCAATGATTG TCATTCCGGT TTTGTTTTAC
GCTCTCATCT TTGGGACGGG TATGGGCATT GAAGGTGCTC GCGAAGATGG GTGGGTTGGC
CAAACAGCAC CACCCGTGCC AGTGCAGGAT CTTTTTCATT TGGTGGACTT TAAGCTTGTT
CATTGGACCC TGATCTCCAA GTGTTTGGCA ACATGGTTGG GCATGGTTTT TGTCGTTTCA
TTTGCGTCTT GCCTAGATGT GGCGGCTATT AGCATGGATA TGGGAGAAGC TTTGGATACA
AATCGAGAAC TGGCCACGGT TGGGATTTGC AACGTCATGT CAGGCTTGAC GTTTGGCTTC
ACGGGCTCGT ACATATTTTC ACAAACAATC TTTACCTATC GGACTGGCGT ACACTCGAAA
TGGATCGGCG TCATTATCAT GATTGTTTTT CTGGCCGTTG TTCTCTCAAC CGTGAACATG
TTACAGGTGG CACCTTTATT CTTCCTTGGA TCCACACTCA TTTTCATTGG ATACGATCTG
CTTTACGAGT GGCTCTTTGA AATTCGACAC AAGATCTTTT TGAGCGAATA CGTTGTCTTA
TGGCTGACTT TTTTAGCAAT TCAGGTCGTC GGTATCAATG CCGGTATTGT TTTTGGTGTA
GTTGTGGCCA TGGTCGATCA TGTCATGACG ACGGCACGCG TTTCTGCTCT CAATCGAGTA
CCGAAGCGAT CGCGTGCTGT TTGGTCTCCA GAACATTGGA AGATTTTACA GACGCACGGA
TACCATTCAC AACATCCCAA AATTGTAACC TATGAGATTA TCGGCTCGGT CTTTTTTGGA
ACAGGCCAGC AGCTGTTATC GACTATTTCG GAAGAGATTG GCATAGATGC AACATTGGAA
GAGGTCACTG AAGAAGCTGC TATTATGAGC CCTCATCGAG CTGGATATCT GATGACAAAG
TCTCCAGGAT CTGGTGGAGC TACAAAGAAA CCAAAAAGTC CCCTTATGAG ACCTCGTCCG
CATTTCTTAG TTCTCGACCT TGCTCAAATG CCGAACCTCG ACGCCTCCGC CGCTCGAGGA
TGCTTTCTTC AGTTGGCAAA GATGTGCTCG AAACGACACA TTCTTGTCTG TGCTGCTGGG
CTGTGCCCAC GTGTGGACTG GATGCTCCGG GCTCACGATG TCGCATACGA TGAAATTGAA
GGAGAAAGAA TCAAACAAGA CATGGAAGGT GGTATTTTGC CAACTGGAAC GTGCGACAAG
ATACTGCCGT TCCTAACTAT TTATGAAGCT CTTGAGTTTT GTGAAAGTCA GTTGATCCAG
CAGTTGGATC GCCTGAATCG GTCGCCATCC TTTATCGGCC TCAAGGACAT TGCTCCATCG
ACAGTGCGCA GAAAAGGGAA AGCAACTCTT GCAGAGGTCT TCTCTTTCAT TTTGGGCTTG
AGGGAAGAGG ACAAAAAGCT TCTTGATAGT CTTTCTGACG AGACTTACCA TCAGGAGATG
GAATACAATG CAGGGGACTG TATGTGAGTA TGATTTCAGT TGACTGCACA ATTCTTACAT
GGTCCCTTGC TTTCTCACTC ACTCTCTCTC CATCTATTTA CCTTAGTTTC CCCAAAGACA
CTCACTCTGA CTCATTTGGA GTTGTGCTCA AAGGTGCTGT CGCAAACGTT CGAGAAGAAC
TCAGCTCGCA TTTGACAACT CACATCGTAT CTGGAGCAGG AAAAGTGTCC TTGACAGGTA
CCGGAAGGAG TACTTCAAAT CTCATGGATC AAGGTGATAT TGGACATGTT CGTTCCTTCT
TGTCGGTCGG AGGAATTTTT GGGTTCGTTG ACTTCCTTTT GGAGCATCAC CGAAGTTTTC
GTAGCGTCGC ATCTCGCGAC AAGACGGTTG TTGCGAAGAT AACACGAGCA GGGCTGGATC
GACTGCAAGA AGAGCACCCT GAGGTTGTGC GAATTGTACA GAGCGTCCTG CTCCAGGCTA
GCGCCATGGA GCTTTCGAAC TGCACGTGCA GTGACTAA
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| Protein sequence | MYLPERNKEE TERTPLVSSR NTVASGTTPR SNVPQHGRSR SNSFREHHGV MPPIASNYPL
PQNKHRVTAS LNAEGFAPRA VPSYTPGVPV TNASSSAYTL GRQPSLPLPP RQRRQPSQDS
TNGPKKGGFF YYIVYAMVNV IISVPGLYGY AAVIFNHEAY NDHMNALSKL VIFSSLMHQL
GFCLFSSLPF AIGTVQDAGL IFLSAMSNIV AKEILANGGT VEEVVSTTLV ILAMSTACLG
LALVAMGKFR LADIVSYLPM PVVGGYLAFI GYFCLQAGVA LCISEPMVGL ADWRYLLESQ
NVLLAAPGLG AGLALTYISR KAESDAALPA AMIVIPVLFY ALIFGTGMGI EGAREDGWVG
QTAPPVPVQD LFHLVDFKLV HWTLISKCLA TWLGMVFVVS FASCLDVAAI SMDMGEALDT
NRELATVGIC NVMSGLTFGF TGSYIFSQTI FTYRTGVHSK WIGVIIMIVF LAVVLSTVNM
LQVAPLFFLG STLIFIGYDL LYEWLFEIRH KIFLSEYVVL WLTFLAIQVV GINAGIVFGV
VVAMVDHVMT TARVSALNRV PKRSRAVWSP EHWKILQTHG YHSQHPKIVT YEIIGSVFFG
TGQQLLSTIS EEIGIDATLE EVTEEAAIMS PHRAGYLMTK SPGSGGATKK PKSPLMRPRP
HFLVLDLAQM PNLDASAARG CFLQLAKMCS KRHILVCAAG LCPRVDWMLR AHDVAYDEIE
GERIKQDMEG GILPTGTCDK ILPFLTIYEA LEFCESQLIQ QLDRLNRSPS FIGLKDIAPS
TVRRKGKATL AEVFSFILGL REEDKKLLDS LSDETYHQEM EYNAGDCIFP KDTHSDSFGV
VLKGAVANVR EELSSHLTTH IVSGAGKVSL TGTGRSTSNL MDQGDIGHVR SFLSVGGIFG
FVDFLLEHHR SFRSVASRDK TVVAKITRAG LDRLQEEHPE VVRIVQSVLL QASAMELSNC
TCSD
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