| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_41886 |
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| Symbol | HAD1 |
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| ID | 7199634 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011673 |
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| Strand | - |
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| Start bp | 798884 |
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| End bp | 799782 |
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| Gene Length | 899 bp |
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| Protein Length | 256 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | 3-hydroxyacyl-coenzyme A dehydrogenase |
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| Protein accession | XP_002179065 |
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| Protein GI | 219116540 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.112729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGC TTGCTCGGAC GGTAGCGCTC GTATCAGGAG GGGCGTCGGG GTTGGGCGCT
GCCACGGCAC GTCATTTGAT CCAGCAAGGG GCCCGCGTAA TGGTCGCCGA CCTGAACATG
ACGTCGGAGA GAGTCCAACC GCTGCGTGAC TGGGCCGTCA GCCAAAACAT TCGACTTTTG
GACGAAAGCG ATACGCTTTC ATCATGCTAC GCTCAGGGCC CTTGCTTGGC GTTCTGTCCT
ACGAATGTGA CCAAATCAGA TGAGGTCAAT CATGCCCTGG ATCAACTGGA ACGAGTTTTC
GGGGAACCTC TCAACGTGGC TGTGTCTTGC GCCGGAATTG CTATTGCCCA GAAGACGCTG
TCAAAGAAAG GTCCTCATGA TTTGGATGAT TTCATTGAAA CAATGATGGT TAACACCGTT
GGCAGCTTCA ACGTGTCTCG ATTGGCAGCA GCTCGGATGC AAGAACGCGA ACCTGACAGA
GATGGTCTCC GGGGCTGCAT CGTGAACACG GCCAGTATTG CTGCTTTTGA AGGACAGATT
GGTCAAGTAG CGTACTCCGC CAGTAAAGGG GGGATCGTGG GAATGACTCT ACCCATGGCC
CGAGAATTGT CGCGATACGG AATAAGAGTT ATGACCATTG TAAGTCCTCG AAACGAAATG
AAATCTGCTA CAATTCATTC ACTGACCATT TATAATGAAA GGCTCCTGGT TTGTTCGAAA
CACCACTCCT GTCAAGGTTG CCGGAGAGTG CTAGGGAAGA ACTGGGTAAC TCTGTTCCTT
GCCCTCGTCG ACTCGGTAAT CCTGATGAGT TTGGGGCTCT CGTAGGGACC GTATTGAGCA
ACCCAATGTT AAATGGGAGT GTGATTCGAC TGGATGGAGC TCTTCGTATG CCACCGTAA
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| Protein sequence | MATLARTVAL VSGGASGLGA ATARHLIQQG ARVMVADLNM TDTLSSCYAQ GPCLAFCPTN
VTKSDEVNHA LDQLERVFGE PLNVAVSCAG IAIAQKTLSK KGPHDLDDFI ETMMVNTVGS
FNVSRLAAAR MQEREPDRDG LRGCIVNTAS IAAFEGQIGQ VAYSASKGGI VGMTLPMARE
LSRYGIRVMT IAPGLFETPL LSRLPESARE ELGNSVPCPR RLGNPDEFGA LVGTVLSNPM
LNGSVIRLDG ALRMPP
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