Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41501 |
Symbol | |
ID | 7199372 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011699 |
Strand | + |
Start bp | 9823 |
End bp | 11264 |
Gene Length | 1442 bp |
Protein Length | 449 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185470 |
Protein GI | 219130644 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.364066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTGC TGGAATCAAT CGGCGCTGCC GAGACTTCAG TACTGGCGGA AAGAAGCACA GAAAAGAAAG ACCTTTCCAG CAGAAGCACC AAAGAAACGA ATATTGACCT AATCGTCGAG CTGTCGATCA CGATCGGATA CGCCATTGTG ACGGGTCTGC TTGCCCGTTG GCTGATAGAT CGGTACTTGA CACCGCAACA ACTGACAGAT ACCGACCAAC CGTCTTCAAA GGAAGTATAC AAAGGGTTGC AACGGATCCT CCAAAAACGG AATCGCGGCA ACACTCAATT GCCGCAGCTC AATTCGTACG AGCTGCAAAT AGCGAACGAG ATTCTCGATC CAGACGATAT AGAAACCAAT TTTGCCGAAA TTGGAGGTTT GGATTCCACC AAGACAGAAA TCTACGAATT GGCGGTGCTG CCGTTGGTCC ATCCGGAACT ATTTACCGGG AAACTCGTAC AGCCTTGCAA AGGCATTCTC CTCTACGGAC GACCGGGTAC GTCAATGGTA ACGCACACAG CACAAACACG CCCCTGTTTT AATCGAGAAA CCTCTCACTT ACTCTCTCAT CCAACTTGGT CATATTAGGA ACTGGTAAGA CTATGCTCGC CAAGGCGTTG GCCAAAGAAT CCGAAGCCGT ATTCATTCCT CTGCAGCTGT CAAAACTCTT GAACAAATGG GTAGGGGAAT CGAACAAACT CATTGCCGGT GCCTTTTCAC TGGCCCACAA ATTACAGCCT GCCATCTTGT TCATCGACGA GATCGATACG TTTCTGAAAG CCAATGCTGG TGAAGGTGCA CAGTATCTCG ATACAATTAA ATCCGAGTTT CTGATACTAT GGGACGGTGT TGCTACCTCC ACCAATTCGA GAGTCATGGT GCTGGGGGCG ACAAACAAGC CGCAGACGAT TGATCCAGCC ATTCAACGGC GCATGCCGCG TACTTTCCAC GTCCCACTAC CGAATGTCGC AGGGCGTCAG GCTATTTTAA ATATATTTCT ACAGGAAGAG AAATTGTCAA TGGACGCACG AGCATGTCTT CCGGAATTGG CTAAGGCAAC GGTGAACTAT TCGGGAAGCG ACTTAAAAGA GTTGTGCAAG GCTGCAGCCA TGGTTGGGAT ACAGGAGCGC ACCGCCGAAT ATGCTCGGAA GCGTGTCATG GGCGAAAGTG TAGCTCTGGA TCAGACAATA GGAAATGCTC CCATGCGACC TATATCGAAA GATGACTTGT TGTCTGCTTT TTCCAAAGTC CAACGAACGG GGGCAGCAGC ACAAGCATAC GGCCGTCAAA CGGCACGGGA GGATGCTGCC GAGCAAGAGT CAGAAAGTCC AGCAGTTGAT GCGGAGGCGT TGCGCAACTT AACTCGATTT TTGCATTCAA TGTCGAATCT TTCCGTCGGC CAGAGCCGTG GGGACGGTAC AGATATCCCC GACCTAAATT AG
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Protein sequence | MTLLESIGAA ETSVLAERST EKKDLSSRST KETNIDLIVE LSITIGYAIV TGLLARWLID RYLTPQQLTD TDQPSSKEVY KGLQRILQKR NRGNTQLPQL NSYELQIANE ILDPDDIETN FAEIGGLDST KTEIYELAVL PLVHPELFTG KLVQPCKGIL LYGRPGTGKT MLAKALAKES EAVFIPLQLS KLLNKWVGES NKLIAGAFSL AHKLQPAILF IDEIDTFLKA NAGEGAQYLD TIKSEFLILW DGVATSTNSR VMVLGATNKP QTIDPAIQRR MPRTFHVPLP NVAGRQAILN IFLQEEKLSM DARACLPELA KATVNYSGSD LKELCKAAAM VGIQERTAEY ARKRVMGESV ALDQTIGNAP MRPISKDDLL SAFSKVQRTG AAAQAYGRQT AREDAAEQES ESPAVDAEAL RNLTRFLHSM SNLSVGQSRG DGTDIPDLN
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