Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41478 |
Symbol | |
ID | 7199236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011698 |
Strand | - |
Start bp | 269728 |
End bp | 270747 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185460 |
Protein GI | 219130622 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATCA TAGGGACGCG ATCATTGAGA TCGCTGCGAG TCACCGGGGG AATCTTGATG TTCTTTTTGC TTTTGACATT ATTGGGACAG TTCTACGTGA AAAATGCAAA TCCGGTCCTT TCCGTAACCA GCCTTTCCAA AAGAAATTCT TCGTCAGCAC TGGCGCTCAA GGCCGATTCC CTCGGAAGCG ATGTGAAGGG AGTCCACCAA AACATGAGAG GTAACTCGGA AGGAAACCAA CTTAAAGGCA TCTATTCGAA AGCACGAACC GACAGATCCG GGTCGGCGAT TCTAGACATG ATGTATGCGC ATTCCTATGC ATTTCACAAC AACATGACAT ACCTCGGTGC TTGTTGGACA AACCCAGAGG ATAATCGCTA CCAGCGCGTT GAGACGCATC AGCACCTACT CATTGGTCTA GGTCTCGCAG AGGAACTCAA GTTTGCCTGC CCCGCAAACT TTACAGATAT ATTGGATTCA TCCATCTATA CTCACAACGG TTCTCAGCGA TGGTCTTCAA AATGGTTGGC ATACATCAGA TCGAGAGTGA ACTACCCGGA GAGAATAGCA TCCGCTTCAC ATCAGACAGC GGTACACATA CGCAGGGGGG ACGTTGATCC GTGCACTCGG GGCGGGGCGT CTATCAAATT TCGCTACTTG ACGAACGCAT ACTACCAAGC AGTGATTGAT ACATTCGTTC CTACGAATAG CAACGTCACG ATATACTCCC AGCTAAAATC GTACGAGAGC TTGGGCGATT TTCAAAAATA TAACGTTTTT GTCAACACGA GTATGGCGGA TACGTGGCGA GAAATGATGA CGGCGGACAC TATCATACTT TCTAGGAGTT CGTTCTCGTT CGTTCCAGCT ATTTTGAACA AGCATGGCAC CGTACTGTAC GCGCCGTTCT GGATTCCCAA GGCCAATGGA TGGAAAACTG TGCCAGAAAA TATCACCAAG CAATCCGACT TTGATTCGTC AAGGCTACGA GCGGCAGCGG GCTGTGGGCG ATCGCCATAG
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Protein sequence | MPIIGTRSLR SLRVTGGILM FFLLLTLLGQ FYVKNANPVL SVTSLSKRNS SSALALKADS LGSDVKGVHQ NMRGNSEGNQ LKGIYSKART DRSGSAILDM MYAHSYAFHN NMTYLGACWT NPEDNRYQRV ETHQHLLIGL GLAEELKFAC PANFTDILDS SIYTHNGSQR WSSKWLAYIR SRVNYPERIA SASHQTAVHI RRGDVDPCTR GGASIKFRYL TNAYYQAVID TFVPTNSNVT IYSQLKSYES LGDFQKYNVF VNTSMADTWR EMMTADTIIL SRSSFSFVPA ILNKHGTVLY APFWIPKANG WKTVPENITK QSDFDSSRLR AAAGCGRSP
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