Gene PHATRDRAFT_4129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_4129 
Symbol 
ID7199952 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp782343 
End bp783281 
Gene Length939 bp 
Protein Length280 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179290 
Protein GI219116991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACGGG TTCTCGGTAA AGGGTCGTTT GGAAAGGTAC ATACGCGTTG TCGTTGTCTC 
CGTCCTTCTT TGTTATCTTT TGTCCTTCAT CAATGTTTTG ATTGTTTCTA ATCGTTTCCT
TATGATTTTT GCTAGGTCGT CCTAGTACAA AAGCGAATTG GCAAGGAACG GGGTCAACTA
TTCGCCATGA AAATTCTTAG CAAAACCCAT CTGGTGAAGA AGCGTCAAAT TGAACGAACT
CGGACCGAAC GCAAAGTCCT GTCTGTCGTG AGTCATCCCT TCATCATGAA GCTGCACTAC
GCCTTTCAGA CGGACGACAA GTTGTATCTC GTGTTGGATT ATTGTCCCGG TGGTGAGCTC
TTTTTTCACC TTTCAAGATT TAGACGCTTT CCGGAACGTG TAGCTCGCTT TTACGCCGCG
GAACTGTTAC TAGCGATCGG GCATTTGCAT AAACGTGGTA TCATTTATCG AGACTTAAAA
CCAGAAAACG TGCTTCTGGA CGCGGATGGG CATGTGAAGC TGGGGGATTT TGGCTTGGCC
AAGGCGGGCA TTAAGCATCC TTGGGAAGGT GCCGCCTCCA TGTGCGGAAC ACCCGAGTAC
ATGGCTCCCG AAGTGTTGTC GCAAGAAGGC CACGGATTTG GCGTGGACTA CTGGGGCCTA
GGTATGCTTG TGTACGAAAT GATGACTGGG CTACCACCGT GGTATACAAC GGATCGAGCT
AAGCTTTTTC GCAGGTTGAA GAGTGCGCCG TTAGAGATTC CGTCATATTT TAGTGGCCAG
TCGGCGAACT GTGTTGGTGC GTTGTTGGAT CGAAATCCCC GTCGACGGCT TGGAGTCACC
GGAATCCGAA CGGCGATGGA GCACGAATTT TTCAGGAGCA TTAGTTGGAA AGCCCTCTAT
GCTCGGCGAG TTGAAGCCCC AGTTCGTCCT TGTGAAGGT
 
Protein sequence
MLRVLGKGSF GKVVLVQKRI GKERGQLFAM KILSKTHLVK KRQIERTRTE RKVLSVVSHP 
FIMKLHYAFQ TDDKLYLVLD YCPGGELFFH LSRFRRFPER VARFYAAELL LAIGHLHKRG
IIYRDLKPEN VLLDADGHVK LGDFGLAKAG IKHPWEGAAS MCGTPEYMAP EVLSQEGHGF
GVDYWGLGML VYEMMTGLPP WYTTDRAKLF RRLKSAPLEI PSYFSGQSAN CVGALLDRNP
RRRLGVTGIR TAMEHEFFRS ISWKALYARR VEAPVRPCEG