Gene PHATRDRAFT_41277 details

Gene Information

• Locus tag: PHATRDRAFT_41277
• ID: 7198995
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011696
• Strand: +
• Start bp: 368192
• End bp: 368974
• Gene Length: 783 bp
• Protein Length: 260 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002185183
• Protein GI: 219130041

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.179887
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCGGCA GCGTGGTGAA GCCATGTCGC TCTAAAAGGC TGAAGGGGGT TCTATCGACA 
CAGACATCTG GATTTTCGGG AGCGTCTGTT GAAGAAAAGC TGGGTTTACA AGCCGATCAA 
CGCAGTGACG AACCAGAAGT AGTCTTGTTC CAACGCGGCC CAGGCCGCGA TGGACTGCCC 
CGTTCCGGTT TATTCTTTTC CTCTCTACAC ACGATCTATT GGATCTGGTA CGGTTTCGAT 
TTTGTGCCCG CCATCAACGC GTCTCCCGTT GCAGATATTC ACATTGATCC GATGATACCC 
TTAGTCGGTA CCGTGTTTGC CGCTTTTATC CAGTTGGTCT TCACGAGTTA CCCGACACGT 
CTTGTGCACA AGCTCACGTG GAGGCCAACA GCACAGTCGC TTCAACTGTA TACTTACAGT 
ATACCATTTA TCCGTCCAAG AACAACTCCT ACAGTGTTTC CTGTAGGCGA AATTATGCTG 
GATGCATCCA GTTCGGATAC CGAGCGCATT TTGAAAGAGT TCGGTGGCAA CATAGACCGT 
TTCAAGGGCC ATCTTGGGAT TTCGAAGCCC GGCGGCTCCT GGCCGCCGTA CCTACTGGAT 
ATGCGTGAAG CATCGGACGC TCCCGAGCCC GAAATTTTGC TGGAGGCCCT GTTGTCCCCT 
GCCGGGATGA CGGTTGGCGG TGCAGGTGCA TTTCAAGTTA GAAAAACCGG AAGTGGTGAA 
GGAAAAAAAA AGAATCGATC ACGAGAAAGC TCCTTGAAAA AAATCATACG TCAACGGCGA 
TAA 

 

Protein sequence

MVGSVVKPCR SKRLKGVLST QTSGFSGASV EEKLGLQADQ RSDEPEVVLF QRGPGRDGLP 
RSGLFFSSLH TIYWIWYGFD FVPAINASPV ADIHIDPMIP LVGTVFAAFI QLVFTSYPTR 
LVHKLTWRPT AQSLQLYTYS IPFIRPRTTP TVFPVGEIML DASSSDTERI LKEFGGNIDR 
FKGHLGISKP GGSWPPYLLD MREASDAPEP EILLEALLSP AGMTVGGAGA FQVRKTGSGE 
GKKKNRSRES SLKKIIRQRR