Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41254 |
Symbol | |
ID | 7198984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011696 |
Strand | - |
Start bp | 307008 |
End bp | 307862 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185255 |
Protein GI | 219130192 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.401564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACCCG CTTCCTCGGA AACAGTATCT ATCGAAGGAG ATCAATTCTT TCTTCATACT TGGACTCCCG ACCTTAAGCC ACGTGCGATT TGCGTCGTCT TTCACGGTTT TCTTGCACAT GGCGTATACC CGACTGTGCG ATACGCTGCT CAGTTGCTCG CTGAGGCAAA CTATCTTGTT GTTGCAGCTG ACATGCACGG CCACGGGAAG TCCCCGGGTA GCCCCGGTCT CTTGCCGTCG GCAGAAAAGG TGCTCGAAGG GGGCCGCAAG GTTGTGACGT ACGCAAGAGC TTTGGATCCG ACATCCAAGA TTTTCCTTTT GGGATCCAGT ATGGGAGGAA CTATAGCACT TTCGGTCGCC AACCACATGT CAGACGTTTC TGGGGTTGTT CTCCTCGCAC CCATGCTTCA ACTTGCGGTA AGTACTCCTG AAAGAATATT GTTGTCGGGC TTGGCGTCCT TACCGTGGGT GAATAATTGG CAAGTAATCC CAAGCTCGGC GGCCTCCTCT GACAAGCAAT ATCGAGACCC AATCCGTCGC AAAGAATGCG AGGAAGACAA ACCCGCTGAA GCACGTAGTT CCTTCATCGC GATCGCATCA GCATCGACCT GTGTTCAACT GGCCCACGAC ATCCAACAAG AATTGCCGAA CGTAACTACC CCCTTCCTAC TAGCTGTGGC GGAAGAAGAC GTAGTGGTTA AAAACCAAGG CTCCTACGAT CTATACGAGA AATCTCCATC TATTGACAAG ACCATGAAAA AATATGCTGC TTTGCATGGA CTACTTTGTG AGCCGTCCCC TTTGCGAGAA ATGGTTGAAC AGGATATTAT CGAATGGCTA AATGCCAGGT GCTGA
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Protein sequence | MPPASSETVS IEGDQFFLHT WTPDLKPRAI CVVFHGFLAH GVYPTVRYAA QLLAEANYLV VAADMHGHGK SPGSPGLLPS AEKVLEGGRK VVTYARALDP TSKIFLLGSS MGGTIALSVA NHMSDVSGVV LLAPMLQLAV STPERILLSG LASLPWVNNW QVIPSSAASS DKQYRDPIRR KECEEDKPAE ARSSFIAIAS ASTCVQLAHD IQQELPNVTT PFLLAVAEED VVVKNQGSYD LYEKSPSIDK TMKKYAALHG LLCEPSPLRE MVEQDIIEWL NARC
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