Gene PHATRDRAFT_41244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41244 
Symbol 
ID7198978 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011696 
Strand- 
Start bp288544 
End bp289221 
Gene Length678 bp 
Protein Length201 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185249 
Protein GI219130179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTACA CTTCTTCAAT CATGCTTGCT TGCTCGGGTG ACATTGCGTC TGCTTTCGTA 
GGACCCCACA ATCTACCGCG AACGAACGGC AGGGAAGCAA TGAAAACAGC GTCGGATAGT 
AGCGCAATCA CTACCCGAAA GGAGGTGCTC CAACACATTT TTGGAGCCGC TGGCTTTCTT 
GCCACGTCTG TAACATTCAT GCCCTCGAGC GCTAGCGCAG ATGTATCCTC TGGTACTGCC 
TTGCCTCAAG GAGCAGCACA ATTCAATCGG GTCGTCCGCG TCAAATCGGA TCTTACGGTA 
CGTACTAAGG CGGTACCTCG TTACTGGCTG TTACATCCTT CTAAGCATTG TAACCGTTCC 
TCTTGTTAGG CTGTCAGGAA GCGTGTGTCA GAAGGCGGTT CGGAGATCGA TAAGAAGGAA 
TGGGACAATA TTGGCAAATT CCTTCGAACG GTTTACTCGA CCGGAGACGA CATGAAAGCG 
GTAGGCGGCG GAGTGTTGGA TCCAGAAAAT AAGAAACGTG CCATGGAGGA TGTCTCTCAA 
TTACGAAAAT ACGCGCAAGC TGGAGACGTT TCCGTCAGCA AAAAAGATCC TATCGGAATG 
TTGGCTGTTT TGAATAAGAT GATTGGGCTC ATGGACGACT TTTTCGATGC TTTGAGCGAC 
ATTCCCGACG AAATCTGA
 
Protein sequence
MKYTSSIMLA CSGDIASAFV GPHNLPRTNG REAMKTASDS SAITTRKEVL QHIFGAAGFL 
ATSVTFMPSS ASADVSSGTA LPQGAAQFNR VVRVKSDLTA VRKRVSEGGS EIDKKEWDNI 
GKFLRTVYST GDDMKAVGGG VLDPENKKRA MEDVSQLRKY AQAGDVSVSK KDPIGMLAVL 
NKMIGLMDDF FDALSDIPDE I