Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41094 |
Symbol | |
ID | 7198889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011695 |
Strand | + |
Start bp | 335619 |
End bp | 336755 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185016 |
Protein GI | 219129691 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGACC TTCCCAACAC TGCGCAAGTG CTGCACGAGG CCATCTTGAC CAACTCTCTC GATGTCGTGC AGTCCTATCT TGGCGCTGCC GGTGTGGATC CCAACCAGTC CCCGCCGCTG TGTCCTCTCG CTCAACTGAA GCGAGCCCTA CGGCGTCCCG ACGCCGTGGC TCACGATGTT GTCGTCGTCG CCACTCAAGA TGTCTATCGC GTTTCACCGT TGCACGTGGC TATATTCAAT TGTTACCACA ATCACGGAAG CCAAGAAGAT CCTACTCCCC GCGAGACTGC CTTGGCGATC GTGCAAGCCT TGGTGGACGC CGGGGCCGAT ACTACACTTG TTGCGTCCCA CATTGCCGTT GTACAGAAAA GAGATTCTTC ACTCATACGT ATACAAGATC GGGCGCCGAT AGGATTGGCG CTGCTTTTGA AACAGAACGC CCGCGGTCCG GACGAAGTGA ATATGGTAGA AAGTCTGGAT GCGGCTATGC AGTGTATCGT GCCGAGAGCG GATGCTAGGG ACGCTTCCGG ACAAGACGAT GTTATTGAAA CCATGACAGT ACCCGAGTCC TTTGCCCAAA GTTTTGGGTC GCTTCTATTT TCACAGGAAT TTAGTGACGT CAAGTTTGTC TGCAAGGATG GCACGGTGCT CCACGCCCAT CAGAATATCC TGGCCGCCGC GAGCTCGTAT TTTCGAACCT ATTTTCAAGG ACCGTGGGGA ACTCTTCACA CCGACGGTTG CTGGAAAACC GAAATCACCC CCGATGTATT GCGTGCCGTA CTCATGTTTG TTTACACGGG GAAAGTAGAC GATGATCTTT TGGAAGAAGA GGCAAAAAAC ATCATTTCGG TGGCTCACGA ATACGAGCTC TTTGATCTGC AATTGCTCGC CCAATCATCG TGCGTTGCCA ATCTGTGTCC CGAAAACTCG AAAGAAATGC TCCAACTCGC AAAATTGCAC GAGTCTGATA CGCTTAAAGA CGCCTGTTTT GACTACATCA AAGAAAATAT GGCCGCTGTC TTGATGCATC CGACCTTTGT TTCTTTGGCC GACGAGGACT CCGCGTTGTG GGCCGAGCTG AACGAATTCT TGCAAGAGTC CCCCACACAA GCGGGCAGGA AACGATCGCG AAGCTGA
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Protein sequence | MADLPNTAQV LHEAILTNSL DVVQSYLGAA GVDPNQSPPL CPLAQLKRAL RRPDAVAHDV VVVATQDVYR VSPLHVAIFN CYHNHGSQED PTPRETALAI VQALVDAGAD TTLVASHIAV VQKRDSSLIR IQDRAPIGLA LLLKQNARGP DEVNMVESLD AAMQCIVPRA DARDASGQDD VIETMTVPES FAQSFGSLLF SQEFSDVKFV CKDGTVLHAH QNILAAASSY FRTYFQGPWG TLHTDGCWKT EITPDVLRAV LMFVYTGKVD DDLLEEEAKN IISVAHEYEL FDLQLLAQSS CVANLCPENS KEMLQLAKLH ESDTLKDACF DYIKENMAAV LMHPTFVSLA DEDSALWAEL NEFLQESPTQ AGRKRSRS
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