| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_41029 |
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| Symbol | |
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| ID | 7198845 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011695 |
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| Strand | + |
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| Start bp | 178801 |
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| End bp | 185193 |
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| Gene Length | 6393 bp |
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| Protein Length | 2073 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184982 |
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| Protein GI | 219129621 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTAT GGAAGTCACT GTGCGAACTG CTTTACTCGA CTCCCATCGT CGAAGAAATA
CCCCGGCCCA GTTGGCATTC CTTGAAAGGC ATTCATGCTC TTCTAGGACC GACGTCGGTC
GTCGAGGAAC CGCCACAACC GCATTGGTAC ATCTTGGAAA GAATTCAGGA AATTCTTGAA
AGCACGATGA CTCGCGTCCC GTCCCGAGAG CACCTATACT TTAGTATTGG AACAGCATTT
CTCGTACTGA TACTCTCTTT TAGCATTTAT TTTAAACCGT TCTCTCGTCC GCCCCCAGTG
CCGCTAAAAG AACTACCGAA AAGACCAATT CTACAAATTT TATTTCACCC CGATGATATT
GCTGCAGCAC AGCCCGGCAC AAGCACGCGC ATGTCCAGGC TCAACGCATC GAGGACAGTC
GCTTCGAATA CGCTCAACAC CCGGGTCCTT GGGTCCGTCA GGTCTCCGGT TGCTTCGGAA
GCACCGTCGT TTTGGAAAGG TCGCTTCCGC ACTTCTCTGG GATCGTTTCC CAACATTTTT
CACGCTTCAC AACCGAAACC TGCATCCGAA GGACGTCAAC AGAAGAATCA AACGCGAGTT
GAGATTGAGG TAGAAACTGT CACCGATAAG GTCGATGACG ACGACTTGAC ACCAAGTGAA
CATCTCCCGG CAACCGATGA CATTGGACTT TCCTACACTC TCGATGATCC GCCTTCGGAG
TCAACATCGG TGGAAGGATC GACATCGATT CATGATATTC CGTTTCGTCG AGTGACAGAC
TTGCCAGATT CGTTTGCTCC CCTCTTGTCG TCTTCACACA TGGAAATGTT GCACGACCGC
TTGACGGCTG ATTTAATTCA CGCTGTATCC TTGCAGAGCA GTTTTCGTGT GCGACAGGGA
CGTCACGAAA TCCCTCTCGA CAAGGATAAT AGACGTCCTC AATTTTGCTT GCATGTGCCA
AAAGGAGGCT GCCGCATGTC ATTGACGGCA GTGGTCGGAA GTGACGGGTT TACGAAGGAA
CAGGATTTGA GCATCAGGAC CAAGACAACC GCCCGTTCCA AGCCTATGGT CAAATGTGTT
GATCTCGTGG CGGATCCTCC GCTACCGCTA GGCAATGTAG CACCAACCTT GATTCACTTC
CCAACACTTT TCGAAGATGA CTTTGTTCCG CGCTTGCGCA GGATTCAAAT TGTCCGCTGG
GTTATTGACT TTCTTGTGTC AATGTCGAGT TTTTTAGAGC GTTGCTTGTG GATCATCGAA
AGTAAGTGTC AAGTCCATCT TTCGAAAGTT CGAGTGATGC CACTATATCG GGGACGTTCG
GACAATAAAG AGTCGCCTGA ATGGCGTTTG AATTTGGCGT TCTCGGGGCA CGCTTTGTTG
TTTGGTTGGA TCCCTGTTCC ATTCCTGAAT ATATCATTGC CATCATTCAT CATTCCACAA
CCGCATGCTC TATTGGAATA CTTGCTGTCG CCGCAGCCCT TAGCGTCAGC TCGCTTAAAG
CGTGAGAATA TCGCTGAAGA TCGAATCACC TTGGCTGTTT TGAATGCTCT AGAAAGTTGG
CATTGTCATT TAAAGCTGGT AGCCACTCCT CCTGCTATCG GTGTGGACTT GACTTTACCA
GGAGGACTCA CGGTTGCGAT GGAAGTTGGG TTGGGCCGCG ATCCCACCGC AGGGACACGG
AATGACTCGG GAGTTGAAAC TACTCCCCCA ACGTCCTCTA CATACGAAGA GGCTGATCAT
CTCTCAGTTA ACTCAATGTC TTCGTGGACG ACAAGAAACG ATAAAAGCGT ATCGACCAGG
CGGCTGAAGT CTCTCTCCAG TACTGGAATA CCTCAATTCG ATGCGAATCA ACTAATTCCG
TGGTTTTTGG AATTAAAAGC CAAAGGATCT TTCAGCCATG AAAAAGTTTC TGTCCACATA
GTCAAGTTGT CAGCTTCACA CGAAGAGGCG ATTGGCAGCA TACCGAGTCA AAGTCACTTT
GCCACTCGAG GCAGTATAGC AATCTGGAAA GTGGGGAGAT CTGAACAACA CTTATCTTCT
ATGACACCAA TGGATGATCT CGCACCCTTT CCTCTCCGTC ACCGCTCATC CTTTGGCCGG
CATCGTCGCA AGAATTCTTT CGGACGACCA GCGCTTGAGA CGGACGATTC ACCTTCGGTT
GCAGAAATTT TTCTTTTCCA CGAGGAGGTT TCATCATTTC GTGATGAGCG TTTATTGCAC
TATGATTATG CGTTTGATGT ATATGAGGAC ACCAAAGTTG ATGCGGTTAC TTTGTCAATC
GGTGCGACTC ATCCTATGCT AAATGGTGGA ACGATGGTTA CGACAATTCT TGATACAATT
TACGCTTTTG GATCGGTGAC TGCGAGAGAG GGTGCTGTTT TGGATCCCAG CGAGCGCAAC
CAAAAGAGGA ATATTCTTCG ACATCTGCCA GCAATTGACT TCACATTTGG TACCCAAAAC
ATTTATATTC CGTCCGAAAG TGCTAGCTAC TCAGACGATG GGCAAACTTT GCTAATTCCG
GAAATGGATG GTGGTCGTAT GATGGTCCGC TTCCTTGGTG GCTTTGACGA TAAGAAGACG
CCGAACAAGC TGGTTGCTCG TTCATCAGAT GTGGTCGTGG AAGGTATTAA ACTCTTGGCT
GATTTTGGGA TTGGCAACCT ACACTTCAAA ACAGAAGGCG CAGTGAGAGA ATTTCCGGAG
CTTGAGATAT TTGAGGATCA AAAATTACAA TCGCTAGTTT CGGGTATCAT CGATGGAAGC
ATCAAAGCTC ATCTAAGGCC ACAGATTTCG GTGGCACCAG CTTCGACGAT TTCGACGATA
GGAAAGAATG TTTTTAACCC GTATGTTCTT ATGTCATCTG GATTGACTTC ATCCTGAGCA
AGCTCTCACA AACTGCTTTT CGACTGTCGT TAAATTCAGC CTGGAAGCGT ACGAAATTGA
TTTTTCAAAT ACGAACTTAT CAGTGAAAAT GAAGGAGTAC GCTGTATCGC TTGGGCATAG
ACGCATAATA TTCCCGACCG AGTCGACTTT CGTCATCAAC GTTATTGATA GTATTGTCGA
TATGGGATTT GAGGGCAAGA CGCAATGCGA GCTCAGTTGG GACTTCCAAG GTTTGTCGCC
TATTCTACAA GTAACTCCGC TCGGCATGTC GCCTGCGTTC GCACAACCTG AAAATAAAAA
GCAAGCATCT CTCCTTGTTG CCCCTCTCCG TCAAGGCCGC ATCTCGTTCC ACGTTTCGTC
AGTTGGAGGA ATAAGCATTC AGAAGGCGGT GACATCGCGC GAACATAAGG AGGGCCTGTA
TGACTGGAAA TTTTTCAACG CTCTCGTCTC GCCCGACGAC GATTCATTTT CGCGGATTAT
CGATGTCCTG CATGACAAAT TGACAATGAA TAAACTGCTA CAAGTCACCC AGCTTGTTAA
TGAAGATATA TACAAGATTC TAAAGTACAT TCTGAGACAA ATCTGGAGGG CGAAAGAAAT
TTTCGACCAA GAAGGCGTCA CTGAACCTGG CCACGTTATC CCAATGTACA AGATGACTAG
ACTGATCGCT TTGTTTTTGA CTGGTGACGT ATACAAGGTA GATGAAATTC TTCCCATGGT
CAGGCGCGTC GTCAATGGCG AAGGGCTTGA CGTTGTCAAA CTGAAAGATC TTCTTCATCT
TCATCTGGAG CAGTACGACC GATGGGCAAC GGAGATTGAT CGAGTCGTAC GTTGTGCAGC
TGTTATGTTT AGCCCTATGG CAGCTGCTCA GCCTTACCTG GAAGACAACG TCAAGCCTCT
GGCGGAGCTT ACGCACCACG CGGCCAAATT TGATAAGATT CCTAGTGCCA GGCATTTATA
CGACCAAATT TCTGGCAAGC GGAACCTGCC GTTAGATCCA TCCTTTTCGA ATATGGTGAG
CCGACTTGCG CCATACCTCA GCTTTCGGCA AGTTGAATTC ATTTTGCAGG CAAGGAATTC
TACCGACTGG CAGCCATCCG ATCTTAGAAG AATTCGCTAC GTCTATTCAA TTAAACGGAA
AGTGCAAGAT ATCGCCGAAA GCTACGGTGG TTTGTCTTTT TTACCACAAA GCTTTCTTGT
TTCGGTCTTT CTTGGTGAAG CGACGAGGAC AAGTCTTTTT GCATCTCGCA GAAGACGACG
CATGCGCAGG TCGGACACTC ACTCTTCAAT GTCACTGCAG AAGACACCTA TAAAGCAAGC
GACTTTGTCT GCGTTGCGTC GGAAGCGATC AGGGGTGAAA GATGGCCGTT TGTTTCGACT
TTCTGAGACA GAATCTATAT TAGACAGCGC ACAGCAAACT CCTGCTGAAC GCATTGCTTC
CGCTTCGAAT TTCGCTACAC TAAAGCGAAT CGACATCCCG GAAAAGGTTG TTATTGGTCT
AGATGCTTCT AACAGGAAGC CAGATGATCC GTACGAGCTC GGAGATTCCC TCCTAGGCCC
GCAGGATGTA GCGATTCTCC TGCAGTCCGG TCTGACGTCC GTGATGAAGT CGTCGACTGT
CGTGCAACTG AACCAAAGAA TGCTTTTGGA CTTAATATGC AGCCAACCTA GATCCTTTGC
GATCGCGGTC CTGGCTGAGA TTGGAACTCC TGGAGGGCAA GGGTCTCCGC GAAGTCTTGC
ATCAGCACTG ATGGCTCTTC TTGAGCTTGA CCAAACAGCT TTTCAATCTA GTCACAAAGT
TGATTTGCAT GCACTAGTGG AGTCGTGGCT CCCCGGTTTA AAAATCCCGA GACGTGACGA
TTACATGGCA GGCGGCCGGT GGGCTAGGCA AAGCTACTAC GAAGCGCTTT TCTCCGTGGC
AACGAGCATC CTCGATGACG CTGAAACATA TGTAGCATTG AAGGGGCATG TCCAAAGAGT
TCGTATGCAT CTAGAAACTG ATCCAATCCC AGGTCCTCGC ACGGAGCACC GCAATGACGT
AGGCATGAAC GTCGAAGATT CCGTCTTCTC TCAGGAACCC CATGAGTGCG GAACAAAATT
GAGCCAAGCC ATCGAAAAGG CAAAGTCGGG GATTGCTGCA GCGGATGCAG CTGGCTACTC
AATCTTGGAG AATCTCCTAC AAGATGAATC GTGCGGAGAA TCAAACACGA AATTTCAGGT
AGCTGTGGGA TTGTACAAAG AGGCATTCCG AGCGTCTGCC GACGTACTTC GACTTGATCG
TTATTCGTTC CACAGTGCTT GGTTTCGCGA TTTCTACCGA CGAAACTACG ATGCGTTGAT
GATTCTGTCA ATCTTTGACA ATGTAGTTGA AAATGTCGAC AATGTGCGAA AGTGGTAGGT
AAATCGAATC AATCATCGGG GTTAAATGGG ATTACTCTAA CTTCGGCTTT GAAACTTTTT
CCAGGCTTCA AGCGCTGCGA AGCAGTGTCC AGGGAAGCGC AACGCTAACG AATTCGAAGG
AGGCAGACGG AAATGCGTCC AAAGACCATC GCGAAGCTCA AATGACCACC ACCAGTTTTG
ATTCGTCTGC TCCCCAGTGC GACAATGGCG ACACTACGTT CGTGAATGCC GAGCAGCATA
GTGACCAGTT TCTGATCGAT GCGATAATTG ACGCTGTCAT TTTTGAGCGA AGCGAGAGAG
AGGCGCTACG CAGTGACCCG CTGGTGCGTT TACTTGTCCG AAACGATCCA GGACATTACA
ATTTTGTCAT CGTCTCAGCA ATGGGAGTTG TTACCGAGGG GAAGAAGGGC CTCGAACTTA
AAGATGCATT TGATCGACTA GACGCCACTC GTGCTGTCAA AGTGATTCGA GCTGATACTG
GAACAGCACG ATCATTCGAG TACAATGCGA AAAAAATCGA GGACGCAATT GAGGAAGCCG
CGGACTTGAA GAAACCGTTT GGCCTGTTGG GATACTCGCA AGGTAGTGCA AATGCTTTGA
TGGCAGAAAC TATGCTTTTG TCAGGTTCGC CAAAGCAGCA AGAAGCTCTT GTGCAAGGAG
GCGGTCTTGT GTGTCGGCAG CTTATGTTCT CGGCAGCCAA CGGCTCGTAT CATGGTCCAG
CATCGGAAAA GAAGATCCAT AGTCTTATCA TTATGTGCGA AGACTTTTTC AAGTATCAGC
AAGGCTACGT CAGCAAAGCT TTTGCATCAA CTGTTCTCGA AGCACTGACT TCGATAATGG
ATTCTTCCGA ATTTCACAAA ATGATGGGCG GTGCCAATTC GTTCCTTCCG GACGGTTGTC
GAGCGTTCTG GAGAGAGGCA CAGCACCTTG GGCATGTACC AACGTGCACA TTGAGAGGCG
TGGAAGAAGA CCACACAACA CCGGAGAGCC TCGAGATGAT GTCCAATCTA CTGACGAAAC
AGAGCGGGTC AGCGCTGCAC GATTCTCAAG TCCACGTCTT TGACGCAGTC GGTTATCCGG
TGTATCACAA TAATCGTAAT GGTCGGCTTT TGA
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| Protein sequence | MTLWKSLCEL LYSTPIVEEI PRPSWHSLKG IHALLGPTSV VEEPPQPHWY ILERIQEILE
STMTRVPSRE HLYFSIGTAF LVLILSFSIY FKPFSRPPPV PLKELPKRPI LQILFHPDDI
AAAQPGTSTR MSRLNASRTV ASNTLNTRVL GSVRSPVASE APSFWKGRFR TSLGSFPNIF
HASQPKPASE GRQQKNQTRV EIEVETVTDK VDDDDLTPSE HLPATDDIGL SYTLDDPPSE
STSVEGSTSI HDIPFRRVTD LPDSFAPLLS SSHMEMLHDR LTADLIHAVS LQSSFRVRQG
RHEIPLDKDN RRPQFCLHVP KGGCRMSLTA VVGSDGFTKE QDLSIRTKTT ARSKPMVKCV
DLVADPPLPL GNVAPTLIHF PTLFEDDFVP RLRRIQIVRW VIDFLVSMSS FLERCLWIIE
SKCQVHLSKV RVMPLYRGRS DNKESPEWRL NLAFSGHALL FGWIPVPFLN ISLPSFIIPQ
PHALLEYLLS PQPLASARLK RENIAEDRIT LAVLNALESW HCHLKLVATP PAIGVDLTLP
GGLTVAMEVG LGRDPTAGTR NDSGVETTPP TSSTYEEADH LSVNSMSSWT TRNDKSVSTR
RLKSLSSTGI PQFDANQLIP WFLELKAKGS FSHEKVSVHI VKLSASHEEA IGSIPSQSHF
ATRGSIAIWK VGRSEQHLSS MTPMDDLAPF PLRHRSSFGR HRRKNSFGRP ALETDDSPSV
AEIFLFHEEV SSFRDERLLH YDYAFDVYED TKVDAVTLSI GATHPMLNGG TMVTTILDTI
YAFGSVTARE GAVLDPSERN QKRNILRHLP AIDFTFGTQN IYIPSESASY SDDGQTLLIP
EMDGGRMMVR FLGGFDDKKT PNKLVARSSD VVVEGIKLLA DFGIGNLHFK TEGAVREFPE
LEIFEDQKLQ SLVSGIIDGS IKAHLRPQIS VAPASTISTI GKNVFNPLEA YEIDFSNTNL
SVKMKEYAVS LGHRRIIFPT ESTFVINVID SIVDMGFEGK TQCELSWDFQ GLSPILQVTP
LGMSPAFAQP ENKKQASLLV APLRQGRISF HVSSVGGISI QKAVTSREHK EGLYDWKFFN
ALVSPDDDSF SRIIDVLHDK LTMNKLLQVT QLVNEDIYKI LKYILRQIWR AKEIFDQEGV
TEPGHVIPMY KMTRLIALFL TGDVYKVDEI LPMVRRVVNG EGLDVVKLKD LLHLHLEQYD
RWATEIDRVV RCAAVMFSPM AAAQPYLEDN VKPLAELTHH AAKFDKIPSA RHLYDQISGK
RNLPLDPSFS NMVSRLAPYL SFRQVEFILQ ARNSTDWQPS DLRRIRYVYS IKRKVQDIAE
SYGGLSFLPQ SFLVSVFLGE ATRTSLFASR RRRRMRRSDT HSSMSLQKTP IKQATLSALR
RKRSGVKDGR LFRLSETESI LDSAQQTPAE RIASASNFAT LKRIDIPEKV VIGLDASNRK
PDDPYELGDS LLGPQDVAIL LQSGLTSVMK SSTVVQLNQR MLLDLICSQP RSFAIAVLAE
IGTPGGQGSP RSLASALMAL LELDQTAFQS SHKVDLHALV ESWLPGLKIP RRDDYMAGGR
WARQSYYEAL FSVATSILDD AETYVALKGH VQRVRMHLET DPIPGPRTEH RNDVGMNVED
SVFSQEPHEC GTKLSQAIEK AKSGIAAADA AGYSILENLL QDESCGESNT KFQVAVGLYK
EAFRASADVL RLDRYSFHSA WFRDFYRRNY DALMILSIFD NVVENVDNVR KWLQALRSSV
QGSATLTNSK EADGNASKDH REAQMTTTSF DSSAPQCDNG DTTFVNAEQH SDQFLIDAII
DAVIFERSER EALRSDPLVR LLVRNDPGHY NFVIVSAMGV VTEGKKGLEL KDAFDRLDAT
RAVKVIRADT GTARSFEYNA KKIEDAIEEA ADLKKPFGLL GYSQGSANAL MAETMLLSGS
PKQQEALVQG GGLVCRQLMF SAANGSYHGP ASEKKIHSLI IMCEDFFKYQ QGYVSKAFAS
TVLEALTSIM DSSEFHKMMG GANSFLPDGC RAFWREAQHL GHVPTCTLRG VEEDHTTPES
LEMIAGQRCT ILKSTSLTQS VIRCITIIVM VGF
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