Gene PHATRDRAFT_40996 details

Gene Information

• Locus tag: PHATRDRAFT_40996
• ID: 7198919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011695
• Strand: +
• Start bp: 94095
• End bp: 94721
• Gene Length: 627 bp
• Protein Length: 208 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002184966
• Protein GI: 219129587

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.517423
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTCCA GACTGCATTC CACAGCGCTA CTGCTGACGG CTGTCGCTGG CTGGGTTCTT 
CTCTCGTCCA GCTGCGTGCA ATCCTTTTCC GCCCCATCGT ATTCCCGACG CGAAGCCGTG 
GCGGCAAGTA TCGGTTGGAC CACTGCCGTT CTGTCCCAAC ACAGTCCAGC GTGGGCGGTA 
GCCGCTGGAC CTCCCACGAA AGAAGATCTG GAACGGATCA GACTCGGACA CGCGCAAATT 
GTCGATTTAC TCGACAATTT TGAAGCCGCT ACCACCGTAT GTCGGGAAAA TGGGGGAGAA 
TGCAAGCGAG ACGCCGAACC CATTCGGAAG GTACTCGGAC TGCGATCCAC CACGGATCCA 
CTCTTTCAGA TTGAAAAGGT TTTTAATAAA GTCAAGAATA TGGATTTGGA TCCGGACGCG 
CTGGAAGCAT TTTTCGAAGC CAGTGAGGAC TGGAATTCGG CCATGAGTCT CAGCAATTCA 
ATGGCGTTTA TTTCGCAATT TGGTGAGTAC AACCCAGGCG GGGGTAAGGA CGAGGTACTC 
AAATACCTCA ATGAAAGTAA AAAGCAAGTC GTTGTTGCCG AAAAAGCCTT GAAGACAATC 
ATGGGGAGCC TCGGCATTGA CGGTTAG 

 

Protein sequence

MLSRLHSTAL LLTAVAGWVL LSSSCVQSFS APSYSRREAV AASIGWTTAV LSQHSPAWAV 
AAGPPTKEDL ERIRLGHAQI VDLLDNFEAA TTVCRENGGE CKRDAEPIRK VLGLRSTTDP 
LFQIEKVFNK VKNMDLDPDA LEAFFEASED WNSAMSLSNS MAFISQFGEY NPGGGKDEVL 
KYLNESKKQV VVAEKALKTI MGSLGIDG