Gene PHATRDRAFT_40834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40834 
Symbol 
ID7198775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp59062 
End bp59730 
Gene Length669 bp 
Protein Length222 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184883 
Protein GI219129411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0278758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAATG ATCCTCGTGC GTGCGATGTC GTGTTTGGTC GTGGCGGCAA TCTCAACAAC 
AGAAGACAGC ACAGCATTTA CCATGCTCTA CTTGAGCGAC ACTGGCTTGA ATATAGTCAG
CAAGTAGGAG CGGCGGCACA CCGGCGTTTC GTACAAGAGC GTTTTATTCA TGTCATTAAA
GAAATGGGAG GAAGATTCTT GAGAAAGAGC AAAAAAGAAA CAGTGTGGGA GGAAGTTATA
GACGAAACCG ATATCGTCTT GACGTTGATG CAAGCCTTGC GAGACTACCG AAAGCGCAGG
TCACGACGTA GGTCTTCGGA GTCTTACGCT TTGATTTCTG AACGCAGGGA AGCAGATACC
GATTCTGATT ACGCTCGATC GGACGAGGGA TCGCCCGTGA TGCTTGAAAC CCTGAATGCA
GGGGACACAG TATACCAGAA GACCGAAGTG CCCCGTCAAC CGTATCTGCA AGTCTCAAAG
TCTGTGGAAT ACAAGGAAAG ACCTCAGGGA GACTTGAGCG CCCTGATGAG CAAGCTCGAA
CCGAGGCTGT GTGAACTGGA AAAGTGCATC GAAAGTCTGG AGTGGAGCAA CAGAGAGCTT
TTCAACAGGC TCGGCGACAT TTCTGACATA GAGAAGGCGG ACGAACAATC CGAGCGTTAT
TCGGTATAG
 
Protein sequence
MVNDPRACDV VFGRGGNLNN RRQHSIYHAL LERHWLEYSQ QVGAAAHRRF VQERFIHVIK 
EMGGRFLRKS KKETVWEEVI DETDIVLTLM QALRDYRKRR SRRRSSESYA LISERREADT
DSDYARSDEG SPVMLETLNA GDTVYQKTEV PRQPYLQVSK SVEYKERPQG DLSALMSKLE
PRLCELEKCI ESLEWSNREL FNRLGDISDI EKADEQSERY SV