Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40834 |
Symbol | |
ID | 7198775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | - |
Start bp | 59062 |
End bp | 59730 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184883 |
Protein GI | 219129411 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0278758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAATG ATCCTCGTGC GTGCGATGTC GTGTTTGGTC GTGGCGGCAA TCTCAACAAC AGAAGACAGC ACAGCATTTA CCATGCTCTA CTTGAGCGAC ACTGGCTTGA ATATAGTCAG CAAGTAGGAG CGGCGGCACA CCGGCGTTTC GTACAAGAGC GTTTTATTCA TGTCATTAAA GAAATGGGAG GAAGATTCTT GAGAAAGAGC AAAAAAGAAA CAGTGTGGGA GGAAGTTATA GACGAAACCG ATATCGTCTT GACGTTGATG CAAGCCTTGC GAGACTACCG AAAGCGCAGG TCACGACGTA GGTCTTCGGA GTCTTACGCT TTGATTTCTG AACGCAGGGA AGCAGATACC GATTCTGATT ACGCTCGATC GGACGAGGGA TCGCCCGTGA TGCTTGAAAC CCTGAATGCA GGGGACACAG TATACCAGAA GACCGAAGTG CCCCGTCAAC CGTATCTGCA AGTCTCAAAG TCTGTGGAAT ACAAGGAAAG ACCTCAGGGA GACTTGAGCG CCCTGATGAG CAAGCTCGAA CCGAGGCTGT GTGAACTGGA AAAGTGCATC GAAAGTCTGG AGTGGAGCAA CAGAGAGCTT TTCAACAGGC TCGGCGACAT TTCTGACATA GAGAAGGCGG ACGAACAATC CGAGCGTTAT TCGGTATAG
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Protein sequence | MVNDPRACDV VFGRGGNLNN RRQHSIYHAL LERHWLEYSQ QVGAAAHRRF VQERFIHVIK EMGGRFLRKS KKETVWEEVI DETDIVLTLM QALRDYRKRR SRRRSSESYA LISERREADT DSDYARSDEG SPVMLETLNA GDTVYQKTEV PRQPYLQVSK SVEYKERPQG DLSALMSKLE PRLCELEKCI ESLEWSNREL FNRLGDISDI EKADEQSERY SV
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