| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_40744 |
|---|
| Symbol | |
|---|
| ID | 7198616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011693 |
|---|
| Strand | - |
|---|
| Start bp | 282788 |
|---|
| End bp | 284616 |
|---|
| Gene Length | 1829 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184770 |
|---|
| Protein GI | 219129173 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGTA CTCGATATAC ATTGATAGCA TGGGCTGTCT CAACTCTGCG AGTCTCGCAG
TCCTTGGCTC CACCGGACCC CGGTTTTGTG GGTGGAGGTC GAAGTTGGCA AGACGTCCAC
GAGTTTCGAG CCATGCACAA TATTACGTTC AAATACGAAC CGTTACATCT ACAAAACGAA
CATTGTCGCT ATTTGACTGA AGCCGAATGC CAACACGACG ATGAAGCTTA CTGGCAATCA
AAATTCAGAC CCCAATCCTC TAAGGAACGA CGACTGAACC CTTCAATTGG TACTTTCCGC
GCTTTGGTTA TTTTAGTACG ATTCACAGAC CACGCCAGCC GACAACTTCC CAGCCCTGCT
TATTTCGATG AACTCTTTAA CGGAGCTAAG GGCTCGGTCA ATGAAGTGGG ATCTGTACGA
GAGTACATGC GATTCAATAG CATGGGAAAG TATAATGTTC AGTTCGATGT ACTGGACTGG
GAAAATGCGG AGAATACCGA ATCGTTCTAT GCCGAAGGGA AATCAGGCCG AGTAGGAAAT
GTTCGCATTC AAGATATGTA CGGTTCGGTG TTGGACAAGT TGGACAGGGC AGGAAAAATC
AATTGGTTTG ACTATGATAT TGGCGGTGAC CCTGAAAATC CTGAGTGGGG CGACGGACTG
CTTGATCATA TAGTTGTTGT ACACTCGGGT TACGGAGCAG AGCAGTAAGT ATAGAGAATG
GTGCGGCTTG ACACCTCAAT TCCCAACAAT TAGGCTCACG CAGCCTTCTT TACTCCATTT
GTTTTGTAAG CGGTGACAAA CAGTGCCTTC CAGGTAGCTA CCTCGATCGC ATATGGTCAC
AAGGATCGGC AAGTAGTAAC GGAGGATGGC GATCATTGGA TGGTAATTTG GAAATTGGTG
GGCATACGAT CGCGTCAGCT TTTGCGAATC CGCGCTGCGA CAGGAACAAT GACTTTCAGC
TTCTTATCGA ACCGAACACA ATGGGAGTCT TCACCCATGA ATATATGCAC GGCTTTCGAA
TGATCGACCT ATACGACAAC GACGGAGACA GCGCGCCAGT TAGGCTTGGA GGGGTGGGGC
ATTTCGACAT CATGTGCAAT GCCTATGGAT GGTTTCGCTC TGGCACAATA CCGGGCTATG
CCAGCCCGTA CAGCAAAATG ATCGCTCAAT GGCTCTCACC TATCGAAATC ACTATGGATG
GAGTGTACGC TGTCCAACCA GCAGAAATTT CCAGTCAAAT TTACATGATC AGTACACCAT
ATCCAGCGGG CGAGTATTTG CTAATTGAAA ACCGGCAGCC GCTGAAATGG GATAAAGACT
GGCCTGGACG AGGCATCGTA ATATATCATA TAGACGAGTT GGCTCCGCGA CAAACTGCGC
GAGGATACCC AGGAGGACCT GGATGGCCAA CCGATCACTA TCAAGTCGCG GTTGTCCAAG
CGGACGGCAA CTTTGACCTC GAAAAAGGTG AAAATGAAGG AGACGAGGGC GATTTCTGGA
CGCGCGGCAT GACATTAGGA GCCGACACGA ACTCGCAGCC AAATACGGCA GCATACCAGA
GCGGAAATCT CCGGTCAACT GGGATCTCTA TCACTATCTT GTCCGATCCT GGTTTCATCA
TGAACTTTCA AGTCGAAGGG TTGGGCGGAA TGCGAGCTCC TGGGCAATTC TGGGACGACG
ATGAGTCACC ACTGGCGAAC AGCGCCCCCG ATTCTATTCT ACCCGTGTCG ACCGATCCTG
GCGGTGGGAC GGGCAAAACG CTGGCCTGGA TTTTCTCAAT GATTGGGGGA CTATCGCTGG
TTGTCGGTCT TATCGCAATA CTACTATAG
|
|---|
| Protein sequence | MVRTRYTLIA WAVSTLRVSQ SLAPPDPGFV GGGRSWQDVH EFRAMHNITF KYEPLHLQNE
HCRYLTEAEC QHDDEAYWQS KFRPQSSKER RLNPSIGTFR ALVILVRFTD HASRQLPSPA
YFDELFNGAK GSVNEVGSVR EYMRFNSMGK YNVQFDVLDW ENAENTESFY AEGKSGRVGN
VRIQDMYGSV LDKLDRAGKI NWFDYDIGGD PENPEWGDGL LDHIVVVHSG YGAEQLTQPS
LLHLFCSYLD RIWSQGSASS NGGWRSLDGN LEIGGHTIAS AFANPRCDRN NDFQLLIEPN
TMGVFTHEYM HGFRMIDLYD NDGDSAPVRL GGVGHFDIMC NAYGWFRSGT IPGYASPYSK
MIAQWLSPIE ITMDGVYAVQ PAEISSQIYM ISTPYPAGEY LLIENRQPLK WDKDWPGRGI
VIYHIDELAP RQTARGYPGG PGWPTDHYQV AVVQADGNFD LEKGENEGDE GDFWTRGMTL
GADTNSQPNT AAYQSGNLRS TGISITILSD PGFIMNFQVE GLGGMRAPGQ FWDDDESPLA
NSAPDSILPV STDPGGGTGK TLAWIFSMIG GLSLVVGLIA ILL
|
|---|
| |