Gene PHATRDRAFT_40694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40694 
Symbol 
ID7198508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp164166 
End bp164693 
Gene Length528 bp 
Protein Length175 aa 
Translation table 
GC content57% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184745 
Protein GI219129121 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.238593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAA CGGAAGAATC TATTCTCAAC ATGGCGGTGA GTACACCAAG GTCCGGTAGT 
ACACCGATTC ATCCTTCAGG GTCGTGCGAA GACCAAAACT GCGCTACTCC CGAGAGGAAA
TTAAGCGCCG GACTGTGGAA TTCTCGTCCA CATTCGCACC AAAGTAGCTC TGCGAGCGAC
GCCGAATCCT CCGAGCTGGT GTATTTCGCC AATCGAGGCC GTAGTCCGCT TATGCCAATG
CTACCGGACT CACCACCAAA TCTGCCCAAG CTAGCATTGC CCTTCCGGTT GAGACCTACT
TCTCAGCGGG TCGCGGCACA CCTACACACG AGGCGGCCAA GGATTCTTCC AGAAAGGAAC
ACGATTGCGT TTATCCCTAT TGAGGATTAT TCCGAAGAAG ACGATTCCTG GCCTGGTGCG
CCACGAGTGG ACGGATGCCC CGATCGGCGG GTGGGGCTTC TCGCACCTCG CCCTCGTCTC
CGGTCCCTAC CGACCTTGCG GGACGCCAAG CGCGCCAAGT CTGTGTGA
 
Protein sequence
MKLTEESILN MAVSTPRSGS TPIHPSGSCE DQNCATPERK LSAGLWNSRP HSHQSSSASD 
AESSELVYFA NRGRSPLMPM LPDSPPNLPK LALPFRLRPT SQRVAAHLHT RRPRILPERN
TIAFIPIEDY SEEDDSWPGA PRVDGCPDRR VGLLAPRPRL RSLPTLRDAK RAKSV