Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40677 |
Symbol | |
ID | 7198586 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | + |
Start bp | 122372 |
End bp | 129240 |
Gene Length | 6869 bp |
Protein Length | 2243 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184650 |
Protein GI | 219128923 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTCGTT CCGACGATGA AAGTGATTTC GATCAGAACG GCGAGCCTCC AATCAATCCT TTCAGTGCTT CTAACTGCGA ACCCCATTCC TCTGCTGCGT CTGCACTGAA AGAAGATTCG TTTCAACTTT CTGAGCGAAG TGCTGCCATT GTTCGAGCCG CTAAAGCTGC GGGACACAAG CGATCGGATT CGATGCTCTC CGGGGACGAT GACAGCGATT TCGGGGAAGC TTCGTCTACA GATCGAACCG GACGAAACGC TTCGTTTGCG TACATGGAAG AGGCTTCTAT GGAAGCATCG CTGCTAAATC ATCTGTCGGA AGACGCTTCG GCTATGGAGA GCACTCGTGG GGGGACGCTA CGGCCAATGG TGACGAAATT ATCTCCAAGT GGAAGACTAG GTCGAAGGCG AACAGAAATT CTATCATCTG ATGAGGTATT GGTGGGAGGA GATCTGGAAG GAATAAGAAA AGCTCCCAGC AACGACCTTG ACGCAAGCTA TGTAGAAATG GACTTTGCTC TTGGAGACGC GTTGCCGTCG CCTTATGACA CAAGTGAAAC ATTTCCGATA AGAGAAACTT CGTTGATGAC CTCCACTGAA ATAGACGATA ATGGACCAAA GAACGTACAA GCCAAAGCCC CTGTAGTGGT TGATATCGGC CAGATCGGAG TTCCGAATTC TTTGTCCCCT TCGTCGTTGG AACCTACATA CGAGATCCTT AAGGCGTATC GGATAATTGA TGACCGTACT GTCAGTGATG ATATTTTGCC CGGAGCGGAG GCAAAAGTAC TCTGCAGCCT TTTTGATGGT TTTTGCTGTC CACCTCTGGA GCTCGACTCG GCTCGAGCAA TTCTGAAGAT GGAAATGAGT CGAATCTATT CCAAAGACGT CTCAATTCCA ATTCCCGAAC AACCCGTCAT ACAAATGTTG GAAAAAGATA ATCGTGTTGT TTCTTTACTG TTATCGGGAG TTGAGCCAAG TCCCGCGATA CTGCAACTTC CACTGCATTT TGCTGCTTCC TTTTTGCGAA TTCTGGTTCG ATTGCTTACA CATGAAACAG ACCCAGAATA CAATCAAACT TGCTTTTTGA TTGAAAAAGA CGTTTTTATT GACCGTGGCA GCCTAGAGTC ACCACCAGTA CACCCAGACC ACTTTACTTC TCGACCACAT ATGCTCTATA GCTCAGCTCG ATTTCAATGT GTGAACGCGT GGAAGGCTCA GAAGAGAGAG CTTGTTTCAG ACTCACAAAT TGCTGTAGAG AAGGTTTTAG ATATATGGGA ACAAGCAGCG GCAACGCCAT CGTGTGCATT GTTGCTGGGA CCATTGGGAC GACTACTAGG TGTCCTAGGG GCTGCTGGGG TCAACGCAAA GACGATTCGG CGTGTTCTGG ATCTGGGACA GGCTCTAGAG CTGCCCATTC TTGCACGAGT CTCAATCGTT CGGGCGCTGA CGACAGCTGC TACGGGCTCA TCGCGTTCAT TGATACTCCC TAAACTTCCA CCCGAGAATT TCTTTCTGTT TGGTCAGCGT GGGTTGAAAC GAAAAATTTC AGGGTTATCA ACTTGGCCGT TTCGAAATGA TTTCGGAGTG GCGGTCTGGT TCCGTGCCGA GCACTTTGGC TCCTCTTCAA ATGTAACTTT GATAAGCGCC AGGTCGGATG ATGGAGGTGG CATTGAAGTA AGCCTCGTCC CACTTGACGA GAAGACGAAT GATGTTTGCA CCGTCTCAGT TTCGGTATTC GACTCTGGAA ATGGAAACCT AGTCGCCCAC AGTGTGAAAG TTAGTGCTTG TGTCCTCCTG CCAAGAGTTT GGTACCACCT GGCAGTTAGA CATACTCGAT CGCGACTCAA GGGTGTCTTT TCGCTTTCAA CTCGACAACA AGTGTCGATA ATGGTTGACG GGAAGGTGAT GCTTACCGCA CCACTTCCAT TTCCAAGGAT TTCTGACTCC GATTTCGAGA AGGAGTCGAT TTTGCAGTCA AGTCTTCGGA GGGTAACTTT GCGATCGAGC TTGAACTTAA CTCTTGAATT TGGATCTCAG TTTGACGGAC AAGCTGGAAC AGTATATATA TTTAATGACA CCATCTCCGA TGCCTCTTTT CGTACTCTTT TCGAGCTCTC CGGTGGAAGT TCAGGCGCTC TCAAGCGATC TTCGAGTCGA AAAAACCGCT GGGATTCACG GCGCAGTGAA ATCGTTCGAA AGTCAAAAGC GCTCGATATG AAGACATTAA ATGATGAAGC CGACGAACTT GTTGTTAGTC AACGAAAGAA ATCAGGTTCT CGGCAAAAGG AGATGAAAGC TCGAGTAGTC GATCTTCTTG AAGCCGACGA AATAGACGAC AATGAGCTAG CCCTCGAGTT GCAAAACCCT TCATTCGGCT CCAAAATCTT CGTTGTCTGG GACCCAGAAA GAGTAACTGA TTCTTGTTTA GCAATAGAGC TACACGTAGG TGCACATGTT CAGCTGGAAC AGGCATATCG GTGGTTCTCT AATTCTGCGC AAGACGTCAT ATCTTATCTT GGTGGCATGC AGCTAAGTGT TCCTCTCTTC CGGTCTCTTT TGTCAGATAG GGCTACGGTT ACTCACGAGT CGCAGCGCTT AGAACTGGCG TTCGGATACT CGCTTCAGAG CCTTGTGGAT TTGATATCGT CTTGCGTGAA AGATCACGAT GAAAACGCAA GAGAACTACT TCGGTGTGGA GCCCTGGACG TGTACGAGCA TGTCTTAACT ACCTGCCGAA ATTCGTTTTT AAGCAAACCA GACGAAGGAT CTGTGTTTCA AGCACTGAAT TCGAACGAAA CAATTGCCAA TTCATTCGTT TTGTCGCTTC TTCGACTGCG ATCTGCTTGT GAGCACTATG TTGGCCTCGA GGCGAAAATC TTTTCTAGAT TTTTGTTCAA CTTCGGACTT TGGATCGGGA CATCGACAAC CGCATCCGCT CTCGACCTTG CGTTACTTCC GATTCTTGCC ATATTAACAA GATCTAACGG TGAAAAAGTC AGGGATTGCC TAGGCTCGAA ATATATCGTG CAAGGACTCT GCGAGTTGGA GGCGAAGGGC AGTACAAGCA TTGAAGTAAA CGAAATAGCT GCCAGCAAAA TTGACAAGAA AAATCTGTTT CTTGCAATGC TGTTTGACAT TCTCGTGATC GGAACGTCCC CTCGTGAACT TGCCCCATTT CTAAATTTTC TTTCGTCTAT CCTAGACGCT CAGCGATGGG AGACGATTCC AAGCGATGGT GGTACCAACG ATCCACATTC TTCACTTCAA GCATATACAA AACGCTTGGC AATCGATTGT TCCATTGTTC TCTTTATGCT TCTTCAAGTC CGACCACCAG TCAATGGCCT TTACATGAGT CTTGCTCATT GCTGTGGAAG CGTTCAAGGT GGTGCTGCGT GGATTTTGAG CAGTCTAGTG AACTCAACTG ATGACAACAT TCTCAGTTTG GGCGTGCGCT CAATATGCTC GTACTTGGAA CTCGCTTCGA AAGGTCCGGA TTCAGGCCTA GCGTTTGGTC CTATTCTACC CTCCGAGCCG GAGGCGGCCT CCGGGACAGA CGTTTCTTCG TCCGTTAGGC GAGGGGCAAA TAGGATGGCT CAAATTGCCA AGGGCATCGC TGCAATGGGC CCAACCGGGT CTAAGGGAAC TTCTCTGTAT CCAAAATTGA CCGCTAGAGT TATTTTCAAG CTGTTATGGC ACCTGCTAAG AAGCCATCGC TCTCATCTGG GGCCAAAAAC AAGGGTAGCT CTTCTGTTTT GGATCATGAA TGGCAACAAT TTGACGGTTT CGGCAATTGG ATCTATTGGG ATTCTTAGAA GATATTTTGT AACTGAGGAT GCCATATCTG GATACCAAAT TTCGTTCATT TGGGCAGAAA AGAAACTCTT GGAAGTGGAG AATATTGGCG GGCATGCCAT TCAAGATGCT TTGGCCGTTG GGACTGTGCT CCGGCTGCTT CGTTATCTGG ATAGTCGGGT GAAAGACCAA TGGCTCTCCG ATCTGTTAGA TCTTGCCCGC GGCAATAGAA AGAGTTTAAC AGTGTTGGCA TCGGTCAGTG ATTGGGAAGC AAGCTTATTT CACCTCGCGT CGGAAACTCT CGAAAGTTTT GTAGCTGCCC AAAATCAGGT TGATTTTGAA TCTAAAACAA AATCGGAGGA ATTCAACGCA ACGACCACGG AGCGATCTGA CAATATGTCT ACAGAGCTGT CATTTGTTTT CCATGAGCAA AACAGCGACT CGCTTGATGC TCTGAGAAGC CGATTGGACA CATGCATTGA TTTATATGCG ACTCTGTTAG GTCATATACT TCGAGAAGGA GGAAACAAAG TACGTCCTGT ACCGTGTTGC TTTGCTAGTA AAATGTTCCC CACCTCACCG TTCCAAATCT AGGCTCTTTC TGCTCTAGAA AACGTGTCCG CTTTGGAAAG GGTGTGTGTC AACGGACACA CTGTCCTTCT CCTTCTTCTA AGTAGCTTAT GTGCAAATGT GTTTGAAAAC GGAACTCTGC TCGAAATCGG GTCAATTAGC GCCGAAGATT GGCACGATGT CGATCTCGAA GCAGAGAGCC TTCCATTGAA ACAGAGCGCT CGCCTGGTAA CTGACGCTAT CTTGTCAAAC GGGATGAAGG GGTTGGACAT GACAACAGCT GTCCGCAGCT GGCGATCTTT AAGACATTTG ACCGAGGTGG TAGTTGCTCT AGCCACGAAG AGCGGGTGCG TAGATTGCGA ATGGTGATGT TCTGAGATGC TTCATCAAAC GTCTCATTGT CCTTTTTCGA CATCAATTGT AGCCTCGGCG TCGCTAGCCT CTTTGACTAT AGCAGTCAAA AAGCATCTGC AGTGGACATC GTTTCCAATG GACTTCACGG AATACATTTG CCTGAGTCGA AGGTGAAGGG TATCTCGGCT TACGAATATG GTGACATGGT GAAAGCAATA AGAGAAAGTG CGCTAGATGG GGCTGAGAAA GGACAAGATA TAGACCGGAG ATTATGTGTC AATATCGCTG CTCAAGTTTT AACTCTGTTA GACGCTTTCA TTTTTCCTGA TTCGCTTGAT TCGTCGCTTC CTGCGTCCCA TATACACGGT CTCGCTTTGG TTCGCAGCTC CGAACCCAGA CTAGGTCCGT CGCAAGGGAC ACTGCTCGCA TCGGCGATTC GATTGTCTTT GATACTTCTC GCTCTATTGG AACCGAGCAG CGTTAAGCTT TTGCAGTGCG CGAGCCGATT AAAGTGTCTC TTGTTTTGGG CTCTGGAACT TGTGCGAGAA GAACCAAGTT TGTCTGAGGT TGTGGTCCAG GGAAATATGG CGATGGTTGA CAGGCTTCTT TTGGCTACAG TCCTGCATTG CCACAGAGCG CTTGGGCGCT GCTCCGCGTT GCTCATAGAA GTCGAATCCA GTCCTTTCGA AACGTATTTT GCATCCCGAG AGGACCAGAA AAGACACCAC CGTCGCCTCT TACGTGTTTC TTTGGAGTTA AGGGACATTG CATCCACAGT TTTTCGAGGT CGCAACCATA TTCTGAAGAG TTCCCTGTCA CCTGCAGCGT ACGGCGATCT TCAAGCCAGC CTCGAAGGAG ACCACAGAAT TCATTCAAAG GAAGGTGTTG TTAGGGAGTT TCTCTGCAGT CGATGGGTGA CGAAGTATCA GGATATAGAA ACAAGAGCAG ATATTGCTGT ACCTGAGCAA GCTACGATGG GTACAATAGC ACTAAATAGC GAAGGACCTA CGGTGCAGGG ATTCATCGTA ATCGAAAAGT TAGCGCAAGA GGCTGAAGCA ATTGTCGTGG ACTATGAGAA AGCCCTGCAC AGTTGCTTTG AAAGCTATCT TGAAAGTCAA AGGAAATGGG CGGAAACGGA CGCTGTGCGT GACTTGGAAT ACGATGGCGA TACAATCACC TCGCGATTGT CCGATCGACA TGATAGTGCT ATTGCAGAGC TGACAAAGGC CAAGTCTCGC CGTCGCAACC GCGCCGAGCT TAGATGGCAT CGTCTCGAGC GGAAAGTTGT TGAACCATGG AAGCTAGCAG CTCATTGGAA GCTAGCGCAA TATAGCGATC CAATCGGTCG ACGGCTTCTT ATGGTTCAAA ACAGATACTT CGACTCACAC GAGGATGCGA GCTACGAAGT ATCTTTGGGA AAGGAACGTG ACAGGGAAGA AGAGTATCGC TCATCCGTCC GTCTTGAGAG AGAGAAGAAA GATCTGGCTG AAGTGATGCG TCGCAATGCT GATGCATTTA TCGTTGAAAA CCCTGTAATG GATTGCGAAC CTGTCGAAGA TGATACGATG CACGCTGTGA GTGACAGCGA AGGTTCCACC GATCTGGAAT TGGTTTCAGA CACTGAATCG AACGATGTGT TTGGCAGGAA AGACGCTGAT GACACTTCGG CGAATTCAGA TGGGAATCCC GATGAAGTCC AACGTGATGA GGAATGGGAC AAGATCGGAG CCAGCGATAT TGATAATATT GGTGCGGACG GTGATATCGA TGGCTGGGCG AAGATATTTA TGTGGTCAGA AAGCGAAAGC GTTGTCGCTC GATTTGAAAA TGTCATGCTT ATTGAGCTCC GTAGTTACAC AGAAGGAAAG GTTCTGTTGA CAAATCACGG TATATACTTT CGTCAGATCA GCGACGAAAT GAATGTAATG ACCAAGGAAC CGCTGGGAAT GGACGATACT GGACCCTCAG AGACAAAAGA TCGACGCTGG AGACTGTGTC GCCTGTCGGA AATTCAGGGT CGAAGATACA TGCTTCGACA GCAAGCTCTG GAAATGTTTT TTGCAGATGG ACAAGAGCTT TTCATCAATT TTCCTGCGGG TGGAAAAGAC AGAGATCGAT TTTATGCCAA GATACGAAAT AGCTGCAAG
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Protein sequence | MVRSDDESDF DQNGEPPINP FSASNCEPHS SAASALKEDS FQLSERSAAI VRAAKAAGHK RSDSMLSGDD DSDFGEASST DRTGRNASFA YMEEASMEAS LLNHLSEDAS AMESTRGGTL RPMVTKLSPS GRLGRRRTEI LSSDEVLVGG DLEGIRKAPS NDLDASYVEM DFALGDALPS PYDTSETFPI RETSLMTSTE IDDNGPKNVQ AKAPVVVDIG QIGVPNSLSP SSLEPTYEIL KAYRIIDDRT VSDDILPGAE AKVLCSLFDG FCCPPLELDS ARAILKMEMS RIYSKDVSIP IPEQPVIQML EKDNRVVSLL LSGVEPSPAI LQLPLHFAAS FLRILVRLLT HETDPEYNQT CFLIEKDVFI DRGSLESPPV HPDHFTSRPH MLYSSARFQC VNAWKAQKRE LVSDSQIAVE KVLDIWEQAA ATPSCALLLG PLGRLLGVLG AAGVNAKTIR RVLDLGQALE LPILARVSIV RALTTAATGS SRSLILPKLP PENFFLFGQR GLKRKISGLS TWPFRNDFGV AVWFRAEHFG SSSNVTLISA RSDDGGGIEV SLVPLDEKTN DVCTVSVSVF DSGNGNLVAH SVKVSACVLL PRVWYHLAVR HTRSRLKGVF SLSTRQQVSI MVDGKVMLTA PLPFPRISDS DFEKESILQS SLRRVTLRSS LNLTLEFGSQ FDGQAGTVYI FNDTISDASF RTLFELSGGS SGALKRSSSR KNRWDSRRSE IVRKSKALDM KTLNDEADEL VVSQRKKSGS RQKEMKARVV DLLEADEIDD NELALELQNP SFGSKIFVVW DPERVTDSCL AIELHVGAHV QLEQAYRWFS NSAQDVISYL GGMQLSVPLF RSLLSDRATV THESQRLELA FGYSLQSLVD LISSCVKDHD ENARELLRCG ALDVYEHVLT TCRNSFLSKP DEGSVFQALN SNETIANSFV LSLLRLRSAC EHYVGLEAKI FSRFLFNFGL WIGTSTTASA LDLALLPILA ILTRSNGEKV RDCLGSKYIV QGLCELEAKG STSIEVNEIA ASKIDKKNLF LAMLFDILVI GTSPRELAPF LNFLSSILDA QRWETIPSDG GTNDPHSSLQ AYTKRLAIDC SIVLFMLLQV RPPVNGLYMS LAHCCGSVQG GAAWILSSLV NSTDDNILSL GVRSICSYLE LASKGPDSGL AFGPILPSEP EAASGTDVSS SVRRGANRMA QIAKGIAAMG PTGSKGTSLY PKLTARVIFK LLWHLLRSHR SHLGPKTRVA LLFWIMNGNN LTVSAIGSIG ILRRYFVTED AISGYQISFI WAEKKLLEVE NIGGHAIQDA LAVGTVLRLL RYLDSRVKDQ WLSDLLDLAR GNRKSLTVLA SVSDWEASLF HLASETLESF VAAQNQVDFE SKTKSEEFNA TTTERSDNMS TELSFVFHEQ NSDSLDALRS RLDTCIDLYA TLLGHILREG GNKALSALEN VSALERVCVN GHTVLLLLLS SLCANVFENG TLLEIGSISA EDWHDVDLEA ESLPLKQSAR LVTDAILSNG MKGLDMTTAV RSWRSLRHLT EVVVALATKS GLGVASLFDY SSQKASAVDI VSNGLHGIHL PESKVKGISA YEYGDMVKAI RESALDGAEK GQDIDRRLCV NIAAQVLTLL DAFIFPDSLD SSLPASHIHG LALVRSSEPR LGPSQGTLLA SAIRLSLILL ALLEPSSVKL LQCASRLKCL LFWALELVRE EPSLSEVVVQ GNMAMVDRLL LATVLHCHRA LGRCSALLIE VESSPFETYF ASREDQKRHH RRLLRVSLEL RDIASTVFRG RNHILKSSLS PAAYGDLQAS LEGDHRIHSK EGVVREFLCS RWVTKYQDIE TRADIAVPEQ ATMGTIALNS EGPTVQGFIV IEKLAQEAEA IVVDYEKALH SCFESYLESQ RKWAETDAVR DLEYDGDTIT SRLSDRHDSA IAELTKAKSR RRNRAELRWH RLERKVVEPW KLAAHWKLAQ YSDPIGRRLL MVQNRYFDSH EDASYEVSLG KERDREEEYR SSVRLEREKK DLAEVMRRNA DAFIVENPVM DCEPVEDDTM HAVSDSEGST DLELVSDTES NDVFGRKDAD DTSANSDGNP DEVQRDEEWD KIGASDIDNI GADGDIDGWA KIFMWSESES VVARFENVML IELRSYTEGK VLLTNHGIYF RQISDEMNVM TKEPLGMDDT GPSETKDRRW RLCRLSEIQG RRYMLRQQAL EMFFADGQEL FINFPAGGKD RDRFYAKIRN SCK
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